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. 2022 Jul 27;10(8):1192. doi: 10.3390/vaccines10081192

Table 2.

Description of refined MEV models generated by GalaxyRefine2.

Model RMSD MolProbity Clash Score Poor Rotamers Rama Favored GALAXY Energy
Initial 0 2.602 81.5 1 96.6 7326.88
MODEL 1 1.134 0.968 1 0 96.9 −5724.21
MODEL 2 1.153 0.733 0.5 0 97.7 −5717.53
MODEL 3 1.288 1.011 1 0 96.6 −5711.32
MODEL 4 1.243 0.797 0.7 0 97.7 −5704.9
MODEL 5 1.125 0.789 1 0 98.1 −5701.56
MODEL 6 1.249 0.917 1 0 97.3 −5699.96
MODEL 7 1.053 0.862 0.7 0 97.3 −5698.35
MODEL 8 1.15 0.733 0.7 0.5 98.1 −5698.25
MODEL 9 1.247 1.051 1.7 0 97.3 −5695.52
MODEL 10 1.174 0.903 1.2 0 97.7 −5690.57