FIGURE 2.

Selective sweep around the Cyp6aa/Cyp6p cluster in Anopheles gambiae from Uganda. Upper panel Showing the relationship between the selective sweep (“Sweep”)and the three mutations Cyp6p4‐236M SNP (“P4”), the ZZB‐TE insertion (“ZZB”) and Cyp6aap‐Dup1 (”Dup1”). Each vertical bar represents a single haplotype, colour‐coded to show whether it is a copy of the swept haplotype (blue) and whether it carries the SNP (purple), the TE insertion (green) and the duplication (orange). The swept haplotype and the Cyp6p4‐236M SNP overlap almost completely, while the duplication is found on a subset of these haplotypes. Lower panel extended haplotype homozygosity (EHH) plots around the CYP6P4‐236M and CYP6AA1‐Dup1 variants show slower loss of homozygosity in the swept haplotypes than in the wild‐type