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. 2015 Sep 25;19(6):614–622. doi: 10.1016/j.bjid.2015.08.006

Table 1.

PCR primers used for PCR assays.

PCR product Primer description Primer sequence Refs.
sea sea-Up
sea-Dn
TTGCAGGGAACAGCTTTAGGCAATC
TGGTGTACCACCCGCACATTGA
21
seb seb-Up
seb-Dn
GACATGATGCCTGCACCAGGAGA
AACAAATCGTTAAAAACGGCGACACAG
21
sec sec-Up
sec-Dn
CCCTACGCCAGATGAGTTGCACA
CGCCTGGTGCAGGCATCATATC
21
sed sed-Up
sed-Dn
GAAAGTGAGCAAGTTGGATAGATTGCGGCTAG
CCGCGCTGTATTTTTCCTCCGAGAG
21
see see-Up
see-Dn
TGCCCTAACGTTGACAACAAGTCCA
TCCGTGTAAATAATGCCTTGCCTGAA
21
seg seg-Up
seg-Dn
TGCTCAACCCGATCCTAAATTAGACGA
CCTCTTCCTTCAACAGGTGGAGACG
21
seh seh-Up
seh-Dn
CATTCACATCATATGCGAAAGCAGAAG
GCACCAATCACCCTTTCCTGTGC
21
sei sei-Up
sei-Dn
TGGAGGGGCCACTTTATCAGGA
TCCATATTCTTTGCCTTTACCAGTG
21
sej

sem

sen

seo
sej-Up
sej-Dn
sem-Up
sem-Dn
sen-Up
sen-Dn
seo-Up
seo-Dn
CTCCCTGACGTTAACACTACTAATAACCC
TATGGTGGAGTAACACTGCATCAAAA
CTATTAATCTTTGGGTTAATGGAGAAC
TTCAGTTTCGACAGTTTTGTTGTCAT
ATGAGATTGTTCTACATAGCTGCAAT
AACTCTGCTCCCACTGAAC
AGTTTGTGTAAGAAGTCAAGTGTAGA
ATCTTTAAATTCAGCAGATATTCCATCTAAC
21

22

22

22
tst tst-Up
tst-Dn
AGCCCTGCTTTTACAAAAGGGGAAAA
CCAATAACCACCCGTTTTATCGCTTG
21
eta eta-Up
eta-Dn
CGCTGCGGACATTCCTACATGG
TACATGCCCGCCACTTGCTTGT
21
etb

hla

hlb

hld

hlg
etb-Up
etb-Dn
hla-Up
hla-Dn
hlb-Up
hlb-Dn
hld-Up
hld-Dn
hlg-Up
hlg-Dn
GAAGCAGCCAAAAACCCATCGAA
TGTTGTCCGCCTTTACCACTGTGAA
CTGATTACTATCCAAGAAATTCGATTG
CTTTCCAGCCTACTTTTTTATCAGT
GTGCACTTACTGACAATAGTGC
GTTGATGAGTAGCTACCTTCAGT
AAGAATTTTTATCTTAATTAAGGAAGGAGTG
TTAGTGAATTTGTTCACTGTGTCGA
GTCAYAGAGTCCATAATGCATTTAA
CACCAAATGTATAGCCTAAAGTG
21

22

22

22

22
sdrC sdrC-Up
sdrC-Dn
CGCATGGCAGTGAATACTGTTGCAGC
GAAGTATCAGGGGTGAAACTATCCACAAATTG
21
sdrD sdrD-Up
sdrD-Dn
CCACTGGAAATAAAGTTGAAGTTTCAACTGCC
CCTGATTTAACTTTGTCATCAACTGTAATTTGTG
21
sdrE sdrE-Up
sdrE-Dn
GCAGCAGCGCATGACGGTAAAG
GTCGCCACCGCCAGTGTCATTA
21
cna cna-Up
cna-Dn
TTCACAAGCTTGGTATCAAGAGCATGG
GAGTGCCTTCCCAAACCTTTTGAGC
21
clfA clfA-Up
clfA-Dn
ATTGGCGTGGCTTCAGTGCTTG
GCTTGATTGAGTTGTTGCCGGTGT
21
arcA arcA-Up
arcA-Dn
CACGTAACTTGCTAGAACGAG
GAGCCAGAAGTACGCGAG
21
icaA icaA-Up
icaA-Dn
TCAGACACTTGCTGGCGCAGTC
TCACGATTCTCTCCCTCTCTGCCATT
21