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. 2022 Jun 15;7(4):e00432-22. doi: 10.1128/msystems.00432-22

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Copyright © 2022 Churcheward et al.

This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.

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FIG 2 — Evaluating assembly-binning strategies on the CAMI data set. (A) Total number of bins obtained after binning step. Colors represent quality of genome bins estimated using CheckM: high quality (HQ), medium quality (MQ), and low quality (LQ). (B) Number of MAGs mapping to a source genome within each strategy, corresponding to the number of expecting genomes in the set of MAGs of each strategy. The diagram thus represents the common genomes found in each strategy. (C, D) Number of reconstructed MAGs after independent dereplication using dRep for each binning strategy, at (C) species resolution, consisting of a 95% ANI score dereplication; and (D) strains resolution, consisting of a 99% ANI score dereplication. SASB, single-assembly single binning; SACB, single-assembly cobinning; CASB, coassembly single binning.