TABLE 1.

Enterococcus phages from the Sequence Read Archive

Phage	SRA ID	Title	Location	Sample type
phiV12	SRP077952	INTESTI bacteriophage cocktail genome sequencing and assembly	Georgia	Phage cocktail
phiV12	PRJEB23244	PYO phage cocktail	Georgia	Phage cocktail
phiV12	ERP017091	Gut microbiome in Crohn’s disease and modulation by exclusive enteral nutrition	Guangdong, China	Human fecal
phiV12	ERP006678	Gut and oral microbiome dysbiosis in rheumatoid arthritis	Beijing, China	Human fecal
phiV12	SRP071229	Gymnogyps californianus microbiome raw sequence reads	USA (Los Alamos National Laboratory)	California condor fecal
phiV12	ERP006046	Virus_Discovery_for_Vietnam_Initiative_on_Zoonotic_Infections__VIZIONS_	Vietnam	Viral metagenome
phiV12	ERP001956	Diagnostic metagenomics: a culture-independent approach to the investigation of bacterial infections	Germany	Human fecal
phiV12	SRP051511	New York City MTA subway samples metagenome	USA (New York City)	Subway samples
phiV12	ERP012929	Towards personalized nutrition by prediction of glycemic responses	Israel	Human fecal
phiV12	SRP040146	Clostridium difficile FMT	USA (Massachusetts)	Human fecal
phiV12	SRP115494	Longitudinal multi’omics of the human microbiome in inflammatory bowel disease	USA (Massachusetts)	Human fecal
phiV12	SRP099123	Metagenomic analysis of gut microbiota in sows and piglets	Freie University of Berlin	Pig fecal
CCS3	SRR1438030	Metagenomic identification of novel enteric viruses in urban wild rats and genome characterization of a group A rotavirus	Berlin, Germany	Rat fecal
CCS3	ERR2737461	Virus discovery for Vietnam Initiative on Zoonotic Infections (VIZIONS)	Vietnam	Viral metagenome