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Phylogenetic tree of the 69 MABC clinical isolates and 41 strains with complete genomes in GenBank. M. abscessus strain ATCC 19977 was used as a reference. Strain names in blue or orange indicate those with or without the T28C variant in erm(41) gene, respectively, while black indicates those without an intact erm(41) gene. Strain names are combined with their sequence types; “N” indicates an unknown sequence type.
