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. 2022 Jul 19;10(4):e01478-22. doi: 10.1128/spectrum.01478-22

TABLE 3.

Primers used for amplification of integration sitesa

Amplification step Sequence
Oligonucleotide 1 Oligonucleotide 2
PCR1 ATTCGAAGCGAACAACACTGAC CCTCTTGCAGTTGCATCCGAC
PCR2 AATGATACGGCGACCACCGAGATCTACACCAGGACTGACGCTATGGTAATTGTTGACCCTTCGGATTACCCG CAAGCAGAAGACGGCATACGAGATXXXXXXXXXXXXAGTCAGTCAGCCTGATTGACTACCCGTCAGCGG
a

X corresponds to nucleotide positions used as barcodes for sequencing. The set 1 oligonucleotides from PCR1 and PCR2 bind to the linker, while the set 2 oligonucleotides bind to the MLV LTR.