FIG 2.

Interpatient phylogenetic tree of replication-competent HIV-1 isolates. Maximum-likelihood phylogeny relating among-host near-full-length HIV sequences. The sequence of the reference strain NL4.3 was used to root the tree. All the sequences of each patient clustered together, with the exception of sequence 11D from patient AB. All patients carried subtype B sequences, with the exception of patient X, who harbored a subtype AG virus population.