Table 2.
Genome characteristics of cluster MabR prophages.
| Prophage | attB a | Coordinatesb | Lengthc | ORFs | attL/R sequences | Accession |
|---|---|---|---|---|---|---|
| McProfd | attB-18 | 1,521,426–1,589,648 | 68,223 | 99 | TGCGCCGTCAGGGGCTCGAACCCCGGACCCGCTGATTAAGAGTCA | BK061309 |
| prophiFSAT01-1 | attB-18 | C1 2,104,368–2,172,096 | 67,729 | 99 | TGCGCCGTCAGGGGCTCGAACCCCGGACCCGCTGATTAAGAGTCA | BK061308 |
| prophiFSIL01-1 | attB-22 | C6 162,543–229,039 | 66,497 | 99 | TGCGCCGTCAGGGTTTCGAACCCCAGACCCGCTGATTAAGAGTCA TGCGCCGTCAGGGGCTCGAACCCCGGACCCGCTGATTAAGAGTCA | BK061311 |
| prophiFSQJ01-1 | attB-23 | C10 102,082–169,883 | 67,752 | 102 | CCCCTGTAGGGCTCGAACCTACGACCTACTGATTAAAAGTCAG CCCCACCAGGGCTCGAACCTGGGACCTGCGGATTAAAAGTCCG | BK061312 |
| prophiFVLQ01-1 | attB-18 | C2 360,992–427,679 | 66,688 | 100 | TGACTCTTAATCAGCGGGTCCGGGGTTCGAGCCCCTGACGGCGCA | BK061310 |
a
attB-18 was identified by Dedrick et al. (2021).
b
Coordinates of the selected phage in the host where it was first identified (e.g. prophiFSAT01-1 in the genome FSAT01). The contig number (C1, C2, etc.) is shown followed by the coordinates within that contig. Coordinates are arranged attL to attR.
c
Prophage lengths include 2 copies of the attachment sites.
d
McProf is a previously described prophage (Cushman et al. 2021) found in the M. chelonae genome CCUG 47445.