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. 2022 Aug;32(8):1529–1541. doi: 10.1101/gr.276766.122

Figure 5.

Figure 5.

ATAC-STARR-seq identifies transcription factor footprints. (A) Comparison of ENCODE CTCF ChIP-seq signal to Corces et al. (2017) and ATAC-STARR-seq cut count signal for all accessible CTCF motifs. (B) Comparison of ENCODE ETS1 ChIP-seq signal to Corces et al. (2017) and ATAC-STARR-seq cut count signal for all accessible motifs with the ETS/1 motif archetype. For both, regions were ranked by largest mean ChIP-seq signal. (C) Aggregate plots representing mean signal for the TOBIAS-defined bound and unbound motif archetypes: CTCF, ETS/1, CREB/ATF/1, IRF/1, SPI, NFKB/2.