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. 2022 Sep 1;17(9):e0272990. doi: 10.1371/journal.pone.0272990

Table 2. Genes in the chloroplast genome of four Caragana species.

Category Group of genes Name of genes
Self-replication Large subunit of ribosomal proteins Rp114, 16, 2, 20, 22, 23, 32, 33, 36
Small subunit of ribosomal proteins rps2, 3, 4, 7, 8, 11, 12, 14, 15, 18, 19
DNA-dependent RNA polymerase rpoA, B, C1, C2
rRNA genes rrn16Sa, rrn23Sa, rrn4.5Sa, rrn5Sa
tRNA genes trnA-UGC, trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnfM-CAU, trnG-GCC, trnG-UCC, trnH-GUG, trnI-AUC, trnI-CAU, trnK-UUU, trnL-CAA, trnL-UAA, trnL-UAG, trnM-CAU, trnN-GUU, trnP-UGG, trnQ-UUG, trnR-ACG, trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC, trnV-UAC, trnW-CCA, trnY-GUA
Photosynthesis Photosystem I psaA, B, C, I, J
Photosystem II psbA, B, C, D, E, F, H, I, J, K, L, M, T, Z,
NADH oxidoreductase ndhA*, B*,a, C, D, E, F, G, H, I, J, K
Cytochrome b6/f complex petA, B*, D*, G, L, N
ATP synthase atpA, B, E, F*, H, I
Rubisco rbcL
Other genes Maturase matK
Protease clpP *
Envelope membrane protein cemA
Subunit acetyl-CoA-carboxylase accD
c-Type cytochrome synthesis gene ccsA
Conserved open-reading frames Ycf1, 2
protein synthesis initiation factor infA