Table 3. The genes having introns in the chloroplast genome of four Caragana species and the length of the exons and introns.
Species | Gene | Exon I (bp) | Intron I (bp) | Exon II (bp) | Intron II (bp) | Exon III (bp) |
---|---|---|---|---|---|---|
C. jubata | trnL-CAA | 37 | 350 | 50 | ||
trnV-UAC | 39 | 574 | 37 | |||
trnA-UGC | 38 | 812 | 35 | |||
trnG-UCC | 21 | 682 | 51 | |||
trnI-AUC | 37 | 953 | 35 | |||
trnK-UUU | 37 | 2481 | 29 | |||
rps12* | 26 | 232 | 591 | |||
rpl16 | 399 | 1105 | 9 | |||
rpl2 | 434 | 689 | 394 | |||
rpoC1 | 430 | 790 | 1625 | |||
ndhA | 553 | 1163 | 539 | |||
ndhB | 762 | 685 | 777 | |||
aptF | 145 | 702 | 410 | |||
petB | 6 | 819 | 642 | |||
clpP | 231 | 786 | 292 | |||
petD | 8 | 717 | 475 | |||
pafI | 124 | 711 | 230 | 886 | 153 | |
C. erinacea | trnL-CAA | 37 | 555 | 50 | ||
trnV-UAC | 39 | 572 | 37 | |||
trnA-UGC | 38 | 808 | 35 | |||
trnG-UCC | 21 | 679 | 51 | |||
trnI-AUC | 37 | 956 | 35 | |||
trnK-UUU | 37 | 2494 | 29 | |||
rps12* | 26 | 232 | 588 | |||
rpl16 | 399 | 945 | 9 | |||
rpl2 | 434 | 689 | 388 | |||
rpoC1 | 430 | 785 | 1625 | |||
ndhA | 551 | 1194 | 541 | |||
ndhB | 723 | 680 | 762 | |||
petB | 6 | 822 | 642 | |||
clpP | 363 | 843 | 231 | |||
petD | 8 | 729 | 475 | |||
aptF | 145 | 697 | 410 | |||
pafI | 124 | 714 | 230 | 891 | 153 | |
C. bicolor | trnV-UAC | 39 | 572 | 37 | ||
trnL-CAA | 37 | 555 | 50 | |||
trnK-UUU | 37 | 2494 | 29 | |||
trnI-AUC | 37 | 956 | 35 | |||
trnA-UGC | 38 | 808 | 35 | |||
rps12 | 26 | 232 | 588 | |||
rpoC1 | 430 | 785 | 1625 | |||
rpl2 | 390 | 686 | 435 | |||
rpl16 | 399 | 945 | 9 | |||
petD | 8 | 729 | 475 | |||
petB | 6 | 822 | 642 | |||
pafI | 126 | 714 | 226 | 981 | 155 | |
ndhB | 723 | 680 | 762 | |||
ndhA | 551 | 1194 | 541 | |||
clpP1 | 363 | 843 | 231 | |||
atpF | 167 | 673 | 412 | |||
C. opulens | trnV-UAC | 39 | 574 | 37 | ||
trnL-CAA | 37 | 534 | 50 | |||
trnK-UUU | 37 | 2485 | 29 | |||
trnI-AUC | 37 | 953 | 35 | |||
trnG-UCC | 21 | 682 | 51 | |||
trnA-UGC | 38 | 810 | 35 | |||
rps12 | 26 | 232 | 600 | |||
rpoC1 | 430 | 789 | 1625 | |||
rpl2 | 396 | 692 | 435 | |||
rpl16 | 399 | 1101 | 9 | |||
petD | 8 | 720 | 475 | |||
petB | 6 | 826 | 642 | |||
pafI | 126 | 702 | 226 | 873 | 155 | |
ndhB | 723 | 685 | 762 | |||
ndhA | 551 | 1169 | 541 | |||
clpP1 | 363 | 1628 | 223 | |||
atpF | 167 | 679 | 412 |