Table 2.
Putative genes in AmFV CN Genome.
| Putative function | ORF | size (aa) | Putative protein | Best match with Pfam-A database |
Best match with BLASTP |
AmFV CH–C05 identity | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Pfam code dmain | E-value | Pfam no | Species/Virus | Score | E-value | Similarity | aacession no | |||||
| DNA Replication and nucleotide metabolism | AmFV_027 | 610 | Thymidylate synthase | Thymidylat_synt | 1.5E-85 | PF00303.19 | Malassezia pachydermatis | 284 | 3.0E-84 | 45.5% | XP_017993541.1 | 98.2% |
| AmFV_042 | 556 | Integrase | phage_intergrase | 2.5E-05 | PF00589.22 | Fibrobacter sp. | 55.1 | 2.0E-04 | 27.2% | NLD99342.1 | 98.5% | |
| AmFV_074 | 1955 | DNA Pol | DNA_pol_B | 4.5E-14 | PF00136.21 | – | – | – | – | – | 99.1% | |
| AmFV_095 | 1603 | DNA ligase | DNA_ligase_A_N | 8.3E-09 | PF04675.14 | Athalia rosae | 99 | 9.0E-17 | 24.0% | XP_025602269.1 | 99.6% | |
| AmFV_114 | 879 | RR1 | Ribonuc_red_IgC | 0.0E+00 | PF02867.15 | Cytophagaceae bacterium | 730 | 0.0E+00 | 44.4% | ODS80019.1 | 99.7% | |
| AmFV_216 | 2469 | RR2 | Ribonuc_red_sm | 2.1E-101 | PF00268.21 | Uncultured virus | 391 | 2.0E-121 | 100.0% | ADD74390.1 | 100.0% | |
| PIFs | AmFV_057 | 334 | PIF-5 | – | – | – | Tipula oleracea nudivirus | 170 | 4.8E-06 | 20.0% | YP_009116743.1 | 99.1% |
| AmFV_060 | 830 | PIF-1 | PIF | 7.0E-16 | PF05092.12 | Cyclophragma undans nucleopolyhedrovirus | 91 | 4.0E-15 | 30.0% | YP_010086634.1 | 98.6% | |
| AmFV_077 | 1188 | PIF-0 | Baculo_p74 | PF04583.12 | Hyphantria cunea nucleopolyhedrovirus | 156 | 6.4E-07 | 29.4% | YP_473207.1 | 98.6% | ||
| AmFV_088 | 280 | PIF-3 | PIF3 | 4.4E-04 | PF05006.12 | Malacosoma sp. alphabaculovirus | 54 | 1.0E-04 | 20.7% | ANW12283.1 | 100.0% | |
| AmFV_100 | 402 | PIF-2 | PIF2 | 6.0E-18 | PF04631.12 | Mauternbach virus | 92 | 2.0E-16 | 31.2% | AYP97928.1 | 99.8% | |
| AmFV_157 | 204 | PIF-4 | Baculo_19 | 3.2E-09 | PF04798.12 | – | – | – | – | – | 100.0% | |
| BROs | AmFV_008 | 182 | BRO-1 | – | – | – | Chrysodeixis chalcites nucleopolyhedrovirus | 53 | 1.0E-04 | 33.3% | YP_249718.1 | 100.0% |
| AmFV_016 | 1306 | BRO-2 | Bro-N | 2.9E-09 | PF02498.17 | Helicoverpa armigera nucleopolyhedrovirus | 179 | 1.60E-6 | 29.1% | AMN15974.2 | 94.0% | |
| AmFV_069 | 262 | BRO-3 | – | – | – | AmFV | 1309 | 0.0E+00 | 98.9% | YP_009165820.1 | 98.9% | |
| AmFV_075 | 434 | BRO-4 | – | – | – | Spodoptera litura granulovirus | 52 | 9.0E-05 | 28.0% | YP_001257066.1 | 98.9% | |
| AmFV_106 | 667 | BRO-5 | Bro-N | 3.2E-07 | PF02498.17 | Chrysodeixis includens nucleopolyhedrovirus | 77 | 3.0E-12 | 25.0% | AOL57177.1 | 95.8% | |
| AmFV_108 | 627 | BRO-6 | Bro-N | 8.6E-04 | PF02498.17 | Spodoptera frugiperda ascovirus 1a | 66 | 6.0E-09 | 29.0% | YP_762434.1 | 92.3% | |
| AmFV_110 | 499 | BRO-7 | Bro-N | 6.6E-29 | PF02498.17 | Chrysodeixis chalcites nucleopolyhedrovirus | 87 | 2.0E-15 | 29.8% | AGE61478.1 | 97.0% | |
| AmFV_111 | 437 | BRO-8 | – | – | – | AmFV | 201 | 1.9E-14 | 25.2% | YP_009165857.1 | 98.4% | |
| AmFV_133 | 157 | BRO-9 | Bro-N | 4.1E-03 | PF02498.17 | – | – | – | – | – | 98.7% | |
| Others | AmFV_006 | 1699 | Protein kinase (PK) | – | – | – | Acanthamoeba polyphaga mimivirus | 111 | 6.7E-03 | 26.0% | AKI80069 | 99.0% |
| AmFV_009 | 442 | PARP | Trypan_PARP | 3.1E-04 | PF05887.11 | Paramecium bursaria Chlorella virus CviKI | 179 | 2.4E-09 | 28.4% | AGE51657.1 | 99.8% | |
| AmFV_023 | 648 | ATPase | AAA domain | 4.0E-26 | PF00004.29 | Lasius niger | 124 | 1.0E-27 | 34.0% | KMQ86848.1 | 99.2% | |
| AmFV_034 | 501 | Serpin-like | Pacifastin inhibitor (LCMII) | 4.6E-10 | PF05375.13 | Blattella germanica | 269 | 6.5E-24 | 34.9% | PSN39366.1 | 97.0% | |
| AmFV_043 | 1633 | Myristoylated membrane | – | – | – | Mimivirus sp. SH | 186 | 6.2E-12 | 46.7% | AZL89416.1 | 96.0% | |
| AmFV_068 | 326 | RING finger protein 413R | zf-C3HC4_3 | 2.1E-03 | PF13920.6 | – | – | – | – | – | 100.0% | |
| AmFV_080 | 572 | RING finger protein | – | – | – | Collichthys lucidus | 52 | 1.0E-03 | 33.3% | TKS65457.1 | 98.6% | |
| AmFV_082 | 510 | HZV 115-like | DUF4580 | 2.3E-05 | PF15162.6 | Oryctes rhinoceros nudivirus | 85 | 3.0E-15 | 31.1% | YP_002321369.1 | 99.8% | |
| AmFV_091 | 534 | hypothetical protein | – | – | – | Hirundo rustica rustica | 144 | 5.0E-04 | 40.2% | RMB88007.1 | 98.2% | |
| AmFV_101 | 1982 | Gamma-glutamyltranspeptidase | G_glu_transpept | 1.6E-14 | PF01019.21 | Diachasmimorpha longicaudata entomopoxvirus | 147 | 5.9E-07 | 34.6% | AKS26328.1 | 97.5% | |
| AmFV_113 | 583 | hypothetical protein | – | – | – | Thalassiosira oceanica | 145 | 2.4E-08 | 32.5% | EJK57244.1 | 90.5% | |
| AmFV_123 | 948 | hypothetical protein | – | – | – | Harpegnathos saltator | 122 | 1.0E-24 | 29.4% | EFN83926.1 | 99.8% | |
| AmFV_168 | 1236 | MdSGHV 070 | – | – | – | Musca hytrosavirus | 166 | 2.3E-04 | 29.6% | YP_001883398.1 | 97.3% | |
| AmFV_193 | 969 | Chitin-binding | LOMP_10 | 8.6E-36 | PF03067.15 | Apis mellifera | 136 | 2.0E-31 | 42.4% | WP_180560000.1 | 96.0% | |
| AmFV_235 | 334 | PLC | PI-PLC-X | 3.6E-11 | PF00388.19 | Taibaiella koreensis | 72 | 6.0E-10 | 33.6% | WP_118975952.1 | 100.0% | |