Table 3.
The 10 hypermethylated and upregulated genes.
| CircRNA | circBaseID | Pattern | Gene Symbol | m6A change | mRNA change | ||
|---|---|---|---|---|---|---|---|
| FC | P | LogFC | P | ||||
| chr1:4872867- 4950612+ |
hsa_circ_0093688 | Hyper-up | AKR1E2 | 76.80 | 7.42E-07 | 2.81 | 8.77E-03 |
| chr10:91511103- 91522592+ |
hsa_circ_0019079 | Hyper-up | KIF20B | 7.46 | 4.53E-08 | 2.15 | 2.50E-02 |
| chr17:30320261- 30323896+ |
hsa_circ_0106593 | Hyper-up | SUZ12 | 5.49 | 5.38E-06 | 2.64 | 4.00E-02 |
| chr17:41197679- 41247939- |
novel | Hyper-up | BRCA1 | 5.29 | 4.91E-07 | 2.42 | 4.62E-02 |
| chr2:190717381- 190719854+ |
hsa_circ_0118387 | Hyper-up | PMS1 | 3.53 | 1.96E-07 | 2.42 | 4.62E-02 |
| chrX:73814141- 73815835- |
novel | Hyper-up | RLIM | 3.21 | 9.58E-08 | 2.80 | 2.73E-02 |
| chr9:115336337- 115337531+ |
hsa_circ_0002925 | Hyper-up | KIAA1958 | 2.74 | 2.87E-07 | 3.07 | 2.50E-02 |
| chr6:167435897- 167453827+ |
hsa_circ_0131304 | Hyper-up | FGFR1OP | 2.67 | 2.77E-09 | 2.99 | 3.34E-02 |
| chr1:35558995- 35578782+ |
novel | Hyper-up | ZMYM1 | 2.64 | 9.67E-07 | 2.64 | 3.40E-02 |
| chr8:61707545- 61714152+ |
hsa_circ_0136828 | Hyper-up | CHD7 | 2.43 | 1.74E-07 | 2.68 | 3.87E-02 |