Table 1.
Method | Current Advantages | Current Disadvantages |
---|---|---|
Available methods | ||
Microsatellite markers | Low cost | May be uninformative Need of trio sample |
Multiplex ligation-dependent probe amplification | Low cost Highly effective Possibility of detecting other microdeletions/duplications (as determined by probe coverage) |
Requires ordering provider to suspect WS to order correct probe |
Fluorescence in situ hybridization | High sensitivity May detect translocations (depending on availability of probe coverage) |
Higher cost False negative for smaller deletions Not possible to determinate deletion size Requires ordering provider to suspect WS to order correct probe |
Chromosomal microarray | High positivity Able to determinate deletion size Able to determine CNVs elsewhere in genome. Ordering provider does not need to suspect WS to order this test |
Highest cost of currently available tests Cannot detect balanced translocation/inversion |
| ||
Emerging methods | ||
Noninvasive prenatal testing | Prenatal diagnosis of aneuploidies and large deletions or duplications | Low resolution (detects deletions >3 Mb) |
Facial recognition software | Cost varies with some free software available online | Diagnosis is limited by number of photographs available in database May have different efficacy based on race or ethnicity of patient |
Whole-exome sequencing | Deletion detection performed in research settings | Currently used clinically for single-nucleotide variants in most cases High cost Lowest accuracy for deletion detection |
Whole-genome sequencing | Combined single-nucleotide variant and CNV or structural variant detection performed in research settings | High cost, slow turnaround in some settings |
WS, Williams syndrome; CNV, copy number variation; Mb, million base pairs