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. 2022 Aug 13;25(9):104923. doi: 10.1016/j.isci.2022.104923
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

STAT6 rabbit monoclonal (C-terminal -targeted) Abcam Cat#ab32520; RRID:AB_778113
LAMP1 rabbit polyclonal Abcam Cat#ab24170; RRID:AB_775978
BiP rabbit polyclonal Abcam Cat#ab21685; RRID:AB_2119834
Catalase rabbit polyclonal Abcam Cat#ab52477; RRID:AB_868694
HSP90AB1 mouse monoclonal Abcam Cat#ab53497; RRID:AB_881097
Phospho-PKC alpha (S657) rabbit monoclonal Abcam Cat#ab180848; RRID:AB_2783796
Myc rabbit monoclonal Cell signaling Cat#2278; RRID:AB_490778
Myc mouse monoclonal Cell signaling Cat#2276; RRID:AB_331783
FLAG rabbit monoclonal Cell signaling Cat#14793; RRID:AB_2572291
FLAG mouse monoclonal Cell signaling Cat#8146; RRID:AB_10950495
STAT1 rabbit polyclonal Cell signaling Cat#9172; RRID:AB_2198300
STAT2 rabbit polyclonal Cell signaling Cat#4594; RRID:AB_2271323
STAT3 rabbit monoclonal Cell signaling Cat#12640; RRID:AB_2629499
STAT5 rabbit monoclonal Cell signaling Cat#94205; RRID:AB_2737403
STAT6 rabbit monoclonal (SH2 -targeted) Cell signaling Cat#5397; RRID:AB_11220421
MFN2 rabbit monoclonal Cell signaling Cat#11925; RRID:AB_2750893
COXⅣ rabbit monoclonal Cell signaling Cat#4850; RRID:AB_2085424
Phospho-JNK rabbit monoclonal Cell signaling Cat#4668; RRID:AB_823588
JNK rabbit monoclonal Cell signaling Cat#9258; RRID:AB_2141027
Phospho-ERK rabbit monoclonal Cell signaling Cat#4370; RRID:AB_2315112
ERK rabbit monoclonal Cell signaling Cat#4695; RRID:AB_390779
Phospho-p38 rabbit monoclonal Cell signaling Cat#4511; RRID:AB_2139682
P38 rabbit polyclonal Cell signaling Cat#9212; RRID:AB_330713
Phospho-CREB rabbit monoclonal Cell signaling Cat#9198: RRID:AB_2561044
Phospho-NFkB rabbit monoclonal Cell signaling Cat#3033; RRID:AB_331284
PKC alpha rabbit polyclonal Cell signaling Cat#2056; RRID:AB_2284227
STAT6 rabbit polyclonal (280-480 a.a.-targeted) SantaCruz Cat#sc-1698; RRID:AB_2197235
TOM20 rabbit polyclonal SantaCruz Cat#sc-11415; RRID:AB_2207533
TOM40 rabbit polyclonal SantaCruz Cat#sc-11414; RRID:AB_793274
Aconitase 2 rabbit polyclonal SantaCruz Cat#sc-130677; RRID:AB_2221514
GAPDH goat polyclonal SantaCruz Cat#sc-48167; RRID:AB_1563046
Alpha-tubulin mouse monoclonal SantaCruz Cat#sc-5286; RRID:AB_628411
Actin mouse monoclonal SantaCruz Cat#sc-47778; RRID:AB_626632
Cytochrome c mouse monoclonal SantaCruz Cat#sc-13156; RRID:AB_627385
TIM23 mouse monoclonal SantaCruz Cat#sc-514463; RRID:AB_2923126
Calnexin mouse monoclonal SantaCruz Cat#sc-46669; RRID:AB_626784
Alexa Fluor Plus 488, anti-Mouse Invitrogen Cat#A32766; RRID:AB_2762823
Alexa Fluor Plus 488, anti-Rabbit Invitrogen Cat#A32790; RRID:AB_2762833
Alexa Fluor 546, anti-Rabbit Invitrogen Cat#A10040; RRID:AB_2534016

Bacterial and virus strains

E.Coli. (DH5alpha) RBC Cat#RH617
E.Coli. (Stbl3) invitrogen Cat#C737303

Chemicals, peptides, and recombinant proteins

DMEM WELGENE Cat#LM 001-05
Trypsin-EDTA WELGENE Cat#LS 015-10
Antibiotic-antimycotic solution Gibco Cat#15240-062
PBS Gibco Cat#21600-010
FBS, premium GenDEPOT Cat#F0600-050
Protease inhibitor cocktail GenDEPOT Cat#P3100-005
G418 Sigma-Aldrich Cat#A1720
Puromycin Sigma-Aldrich Cat#P8833
Polyethylene glycol (PEG) Sigma-Aldrich Cat#P7181
Cycloheximide solution Sigma-Aldrich Cat#C4859
Paraformaldehyde Sigma-Aldrich Cat#P6148
Saponin Sigma-Aldrich Cat#47036
PMSF Sigma-Aldrich Cat#10837091001
TCA Sigma-Aldrich Cat#T8657
Percoll Sigma-Aldrich Cat#P1644
Duolink-PLA Sigma-Aldrich Cat#DUO92007
Crystal violet solution Sigma-Aldrich Cat#V5265
Nitro blue tetrazolium Sigma-Aldrich Cat#N5514
Agarose, low-gelling temperature Sigma-Aldrich Cat#A9045
Lipofectamine3000 Invitrogen Cat#L3000015
TMRM Invitrogen Cat#T668
Protein G Dynabeads Invitrogen Cat#10003D
mitochondria-GFP, BacMam 2.0 Invitrogen Cat#C10508
mitochondria-RFP, BacMam 2.0 Invitrogen Cat#C10505
DSP Thermo Scientific Cat#A35393
Proteinase K BIONEER Cat#KB-0111
Mounting medium (with DAPI) Vector Laboratories Cat#H-1200
6nm colloidal gold particle, anti-Rabbit Jackson ImmunoResearch Cat#711-195-152

Critical commercial assays

ATP assay Abcam Cat#ab83355
OCR assay Cayman Cat#600800

Deposited data

Raw and analyzed data This paper Mendeley Data: https://doi.org/10.17632/44fxxng896.6

Experimental models: Cell lines

293T ATCC Cat#CRL-3216; RRID:CVCL_0063
HeLa Korean Cell Line Bank Cat#10002; RRID:CVCL_0030
B16-F10 Korean Cell Line Bank Cat#80008; RRID:CVCL_0159
Hep3B Korean Cell Line Bank Cat#88064; RRID:CVCL_0326
HEK293 Korean Cell Line Bank Cat#21573; RRID:CVCL_0045
T98-MG Korean Cell Line Bank Cat#21690; RRID:CVCL_0556
U373-MG Korean Cell Line Bank Cat#30017; RRID:CVCL_2219
U87-MG Korean Cell Line Bank Cat#30014; RRID:CVCL_0022
STAT6 WT –U373-MG This paper N/A
Δ 1-260 –U373-MG This paper N/A
Δ DBD –U373-MG This paper N/A
Δ LD –U373-MG This paper N/A
Δ SH2 –U373-MG This paper N/A
Δ TAD –U373-MG This paper N/A
Δ 1-50 –U373-MG This paper N/A
Δ 674-847 –U373-MG This paper N/A
Δ 699-847 –U373-MG This paper N/A
Δ 774-847 –U373-MG This paper N/A
MFN2-Myc/MFN2-Flag –293T This paper N/A
STAT6 KO –B16-F10 This paper N/A
STAT6 KO –293T This paper N/A
STAT6 WT-Myc –293T (generated from STAT6 KO –293T) This paper N/A
Δ SH2-Myc –293T (generated from STAT6 KO –293T) This paper N/A
Δ MTS-Myc –293T (generated from STAT6 KO –293T) This paper N/A

Experimental models: Organisms/strains

C57BL/6J OrientBio N/A
BALB/c nude (CAnN.Cg-Foxn1nu/ CrljOri) OrientBio N/A

Oligonucleotides

See Table S2 See Table S2

Recombinant DNA

pCMV6-Entry (Myc-DDK-tagged) ORIGENE Cat#PS100001
STAT6 WT (Myc-DDK-tagged) (Park et al., 2019) N/A
Δ 1-260 (Myc-DDK-tagged) (Park et al., 2019) N/A
Δ DBD (Myc-DDK-tagged) (Park et al., 2019) N/A
Δ LD (Myc-DDK-tagged) (Park et al., 2019) N/A
Δ SH2 (Myc-DDK-tagged) (Park et al., 2019) N/A
Δ TAD (Myc-DDK-tagged) (Park et al., 2019) N/A
Δ 1-50 (Myc-DDK-tagged) This paper N/A
Δ 674-847 –U373-MG This paper N/A
Δ 699-847 (Myc-DDK-tagged) This paper N/A
Δ 774-847 (Myc-DDK-tagged) This paper N/A
Δ 31-260 (Myc-DDK-tagged) This paper N/A
pLenti-C-mGFP ORIGENE Cat#PS100071
pLenti-STAT6 WT-mGFP ORIGENE Cat#RC210065L2V
pLenti-Δ SH2-mGFP This paper N/A
pLenti-Δ MTS-mGFP This paper N/A
pCMV6-AC-GFP ORIGENE Cat#PS100010
31-50 (STAT6 N-terminal fragment)-GFP This paper N/A
1-30 (STAT6 N-terminal fragment)-GFP This paper N/A
1-20 (STAT6 N-terminal fragment)-GFP This paper N/A
16-25 (STAT6 N-terminal fragment)-GFP This paper N/A
16-30 (STAT6 N-terminal fragment)-GFP This paper N/A
21-30 (STAT6 N-terminal fragment)-GFP This paper N/A
11-30 (STAT6 N-terminal fragment)-GFP This paper N/A
pCMV6-AN-GFP ORIGENE Cat#PS100019
GFP-1-30 This paper N/A
MFN2 WT (Myc-DDK-tagged) ORIGENE Cat#RC226143
Δ HR1 (Myc-DDK-tagged) This paper N/A
Δ PR (Myc-DDK-tagged) This paper N/A
Δ HR2 (Myc-DDK-tagged) This paper N/A
pLenti-C-Myc-DDK-IRES-Puro ORIGENE Cat#PS100069
pLenti-MFN2-Myc (-IRES-Puro) This paper N/A
pLenti-MFN2-Flag (-IRES-Puro) This paper N/A
pLenti-STAT6 WT (C-Myc-DDK-IRES-Puro) This paper N/A
pLenti-Δ SH2 (C-Myc-DDK-IRES-Puro) This paper N/A
pLenti-Δ MTS (C-Myc-DDK-IRES-Puro) This paper N/A
pLenti-C-mCherry This paper N/A
pLenti-STAT6 WT-mCherry This paper N/A
pLenti-Δ SH2- mCherry This paper N/A
pLenti-Δ MTS- mCherry This paper N/A
Mouse STAT6 CRISPR/Cas9 KO Plasmid Santa Cruz Cat#sc-423180
Human STAT6 CRISPR/Cas9 KO Plasmid Santa Cruz Cat#sc-418159

Software and algorithms

Image J National Institutes of Health, USA https://imagej.nih.gov/ij/
DAVID The Laboratory of Immunopathogenesis and Bioinformatics https://david.ncifcrf.gov/home.jsp
Prism 9.0 GraphPad N/A
SPSS 25.0 IBM N/A
membrane protein explorer (MPEx) The Stephen White laboratory at UC Irvine https://blanco.biomol.uci.edu/mpex/