Chemicals, peptides, and recombinant proteins |
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2-diheptadecanoyl-sn-glycero-3- phosphoethanolamine (PE(17:0/17:0)) |
Avanti Polar Lipids |
Cat#830756 |
N-heptadecanoyl-D-erythro- sphingosylphosphorylcholine (SM(d18:1/17:0)) |
Avanti Polar Lipids |
Cat#860585 |
1-stearoyl-2-hydroxy-sn-glycero-3- phosphocholine (LPC(18:0)) |
Avanti Polar Lipids |
Cat#855775 |
2-diheptadecanoyl-sn-glycero-3- phosphocholine (PC(17:0/17:0)) |
Avanti Polar Lipids |
Cat#850360 |
1-heptadecanoyl-2-hydroxy-sn-glycero-3- phosphocholine (LPC(17:0)) |
Avanti Polar Lipids |
Cat#855676 |
2-Dioctadecanoyl- -sn-glycero-3- phosphocholine (PC(18:0/18:0)) |
Avanti Polar Lipids |
Cat#850333 |
1-Hexadecanoyl-2-oleoyl-sn-glycero-3- phosphocholine (PC(16:0/18:1) |
Avanti Polar Lipids |
Cat#850457 |
1-(9Z-octadecenoyl)-sn-glycero-3- phosphoethanolamine (LPE(18:1)) |
Avanti Polar Lipids |
Cat#850456 |
1-Palmitoyl-2-Hydroxy-sn-Glycero-3- Phosphatidylcholine (LPC(16:0)) |
Avanti Polar Lipids |
Cat#846725 |
triheptadecanoylglycerol (TG(17:0/17:0/17:0)) |
Larodan |
Cat#33-1700 |
trihexadecanoalglycerol (TG(16:0/16:0/16:0)) |
Larodan |
Cat#33-1610 |
1-stearoyl-2-linoleoyl-sn-glycerol (DG(18:0/18:2)) |
Avanti Polar Lipids |
Cat#855675 |
3-trioctadecanoylglycerol (TG(18:0/18:0/18:0)) |
Larodan |
Cat#33-1810 |
3β-Hydroxy-5-cholestene-3-linoleate (ChoE(18:2)) |
Larodan |
Cat#64-1802 |
1-hexadecyl-2-(9Z-octadecenoyl)-sn-glycero-3-phosphocholine (PC(16:0e/18:1(9Z))) |
Avanti Polar Lipids |
Cat#800817 |
1-(1Z-octadecanyl)-2-(9Z-octadecenoyl)- sn-glycero-3-phosphocholine (PC(18:0p/18:1(9Z))) |
Avanti Polar Lipids |
Cat#878112 |
1-oleoyl-2-hydroxy-sn-glycero-3- phosphocholine (LPC(18:1)) |
Larodan |
Cat#38-1801 |
1-palmitoyl-2-oleoyl-sn-glycero-3- phosphoethanolamine (PE(16:0/18:1)) |
Avanti Polar Lipids |
Cat#852467 |
3β-hydroxy-5-cholestene-3-stearate (ChoE(18:0)) |
Larodan |
Cat#64-1800 |
1-palmitoyl-d31-2-oleoyl-sn-glycero-3- phosphocholine (PC(16:0/d31/18:1)) |
Avanti Polar Lipids |
Cat#850757 |
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Depositeddata
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Metabolomics raw and analyzed data (this paper) |
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Metabolomics Workbench: https://doi.org/10.21228/M8P97V, project ID PR001091 |
RNAseq raw and analyzed data |
(Govaere et al., 2020) |
NCBI Gene Expression Omnibus (GEO) repository: GSE135251
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Genome-scale metabolic liver models (this paper) |
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BioModels: MODEL2102060002 |
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Software and algorithms |
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R v3.6.0 |
Hosted by Vienna, University of Economics |
https://cran.r-project.org/ |
MATLAB 2017b |
Mathworks, Inc., (Natick, MA, USA) |
https://se.mathworks.com/ |
Cobra toolbox v3.0 |
(Heirendt et al., 2017) |
https://opencobra.github.io/ |
RAVEN 2.0 suite |
(Wang et al., 2018) |
https://github.com/SysBioChalmers/RAVEN |
Cytoscape v3.8.0 |
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https://cytoscape.org/ |
Adobe Illustrator CC 2017 |
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https://www.adobe.com/ |