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. 2022 Aug 22;13:942491. doi: 10.3389/fgene.2022.942491

TABLE 6.

The performance evaluation of TPP-I task.

ACC a , b REC PRE F1 AUC
McPAS
-TCR
ERGO-LSTM 0.748 ± 0.004 0.747 ± 0.013 0.748 ± 0.007 0.747 ± 0.006 0.831 ± 0.005
ERGO-AE 0.734 ± 0.004 0.696 ± 0.020 0.754 ± 0.009 0.722 ± 0.008 0.808 ± 0.004
ImRex 0.631 ± 0.003 0.625 ± 0.005 0.648 ± 0.005 0.636 ± 0.004 0.694 ± 0.003
DLpTCR 0.502 ± 0.003 0.500 ± 0.004 0.861 ± 0.003 0.633 ± 0.003 0.529 ± 0.004
NetTCR-2.0 0.728 ± 0.004 0.734 ± 0.010 0.715 ± 0.018 0.722 ± 0.006 0.799 ± 0.004
AttnTAP 0.758 ± 0.003 0.769 ± 0.013 0.752 ± 0.007 0.760 ± 0.005 0.840 ± 0.003
VDJdb ERGO-LSTM 0.834 ± 0.003 0.790 ± 0.004 0.864 ± 0.004 0.825 ± 0.003 0.889 ± 0.003
ERGO-AE 0.837 ± 0.003 0.798 ± 0.006 0.864 ± 0.006 0.829 ± 0.004 0.891 ± 0.003
ImRex 0.561 ± 0.004 0.556 ± 0.005 0.571 ± 0.006 0.564 ± 0.005 0.598 ± 0.004
DLpTCR 0.482 ± 0.005 0.487 ± 0.004 0.861 ± 0.004 0.622 ± 0.004 0.503 ± 0.005
NetTCR-2.0 0.832 ± 0.003 0.851 ± 0.008 0.802 ± 0.007 0.826 ± 0.003 0.890 ± 0.002
AttnTAP 0.839 ± 0.003 0.801 ± 0.006 0.865 ± 0.004 0.831 ± 0.003 0.894 ± 0.002
a

The results show 95% confidence intervals for all the validations (totally 30 validations for each cross-validation).

b

Abbreviations: ACC: accuracy; REC: recall; PRE: precision; F1: F1 score; AUC: area under the receiver operating characteristic curve.