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. 2022 Jul 20;23(9):e54458. doi: 10.15252/embr.202154458
Reagent/Resource Reference or Source Identifier or Catalog Number
Experimental Models
E14TG2a mESC (Mus musculus) ATCC CRL‐1821
HEK293T (Homo sapiens) ATCC CRL‐3216
Recombinant DNA
psiCHECK2‐mMov10‐3'UTR (WT) (mMov10 3'UTR) Addgene this study Cat # 178905
psiCHECK2‐mMOV103'UTR‐MRE16‐mut1 Addgene this study Cat # 178906
psiCHECK2‐mMOV103'UTR‐MRE153‐mut4 Addgene this study Cat # 178909
psiCHECK2‐mMOV103'UTR‐MRE16+MRE153‐mut Addgene this study Cat # 178910
pCDNA3‐T11HA‐hMOV10‐WT (human Mov10 cDNA) Addgene this study Cat # 178907
T10‐T7‐hMOV10 (human Mov10 cDNA) Addgene this study Cat # 185052
T11‐HA‐hORF1 (human L1 ORF1p cDNA) Addgene this study Cat # 185053
pCEP‐L1SM‐WT (hygro) (mouse L1 neoR cassette) Maclennan et al (2017)
JJ‐L1SM WT (mouse L1 BlastR cassette) Maclennan et al (2017)
JJ‐L1SM N21A (mouse nutant L1 BlastR cassette) Maclennan et al (2017)
pKLV‐U6gRNA(BbsI)‐PGKpuro2ABFP‐L1mono3 Addgene this study Cat # 73542
pKLV‐U6gRNA(BbsI)‐PGKpuro2ABFP‐L1mono1 Addgene this study Cat # 73543
Antibodies
rabbit polyclonal anti‐ORF1p (IF 1:1,000, WB 1:4,000) kind gift from Prof. O'Carroll NA
mouse monoclonal 15C1BB anti‐MOV10 (IF 1:500) Bethyl Laboratories Inc A500‐009A‐T
rabbit polyclonal anti‐G3BP1 (IF 1:500) Bethyl Laboratories Inc A302‐033A
rabbit polyclonal anti‐LC3B antibody (IF 1:250) Cell Signaling Technology 2775
rabbit polyclonal anti‐DDX6 (IF 1:500) GeneTex GTX102795
rat monoclonal anti‐HA (IF 1:500) Roche 3F10
Rabbit monoclonal T7‐Tag (D9E1X) XP (IF 1:250) Cell Signaling Technology 13246
Goat anti‐RENT1 antibody (IF 1:250) Bethyl laboratories A300‐038A
Alexa fluor 488 goat anti‐rat IgG (IF 1:4,000) Life Technologies 11006
Alexa fluor 488 donkey anti‐mouse IgG (IF 1:4,000) Life Technologies A21202
Alexa fluor 546 donkey anti‐rabbit IgG (IF 1:4,000) Life Technologies A10040
Alexa fluor 647 donkey anti‐mouse IgG (IF 1:4,000) Life Technologies A31571
Alexa fluor 488 donkey anti‐goat IgG (IF 1:4,000) Life Technologies A11055
rabbit anti MOV10 antibody (WB 1:2,000) Proteintech 10370‐1‐AP
rabbit polyclonal anti‐Dicer (WB 1:2,000) Sigma SAB42000087
rabbit polyclonal anti‐Argonaute2 (WB 1:2,000) Cell Signaling Technologies C34C6
rabbit anti‐Drosha (WB 1:2,000) Cell Signaling Technologies D28B1
mouse anti‐Tubulin antibody (WB 1:10,000) GenScript A01410
rabbit anti‐LaminB1 (WB 1:5,000) Abcam ab16048
anti‐rabbit IgG HRP‐linked (WB 1:10,000) Cell Signaling Technologies 7076
anti‐rat IgG HRP‐linked antibody (WB 1:10,000) Cell Signaling Technologies 7077
Oligonucleotides and sequence‐based reagents
Experiment Fwd Primer Rev Primer
mMOV10 3'UTR PCR amplification taggcgatcgctcgaggccacagccgcccgcctt ttgcggccagcggccttttgcatagaacagcattttgt
miR16‐5p (CTG>AGT) mut1 mutageneis acccaagagtctaaaactcggaggaaggggg tttagactcttgggttgtcttccctagc
miR153‐3p (TGC>CAT) mut4/mut1+mut4 mutagenesis tgttctacataaaaggccgctggccgca cttttatgtagaacagcattttgtttttctt
hMOV10 cDNA PCR amplification ggtcggaggcggatccatgcccagtaagttcagctgc gatatctgcagaattctcagagctcattcctccactc
hORF1 cDNA PCR amplification ggtcggaggcggatccatggggaaaaaacagaac gatatctgcagaattctcattacattttggcatgattttgc
Guide RNA L1UP mono3 caccgccagagaacctgacagcttc
Guide RNA L1UP mono1 caccgccagaggacaggtgcccgcc
mmu‐miR‐16‐5p mimic uagcagcacguaaauauuggcg
mmu‐miR‐30e‐5p mimic uguaaacauccuugacuggaag
mmu‐miR‐138‐5p mimic agcugguguugugaaucaggccg
mmu‐miR‐153‐3p mimic uugcauuagucacaaaagugauc
miRIDIAN microRNA negative control 1 catalog no CN‐001000‐01‐05
qPCR Rrm2 ccgagctggaaagtaaagcg atgggaaagacaacgaagcg
qPCR Mov10 gacgatttacaaccacgacttca gccagatttgcgatcttcattcc
qPCR Dicer ccgatgatgcagcctctaatag tccatctcgagcaattctctca
qPCR L1‐Tf cagcggtcgccatcttg caccctctcacctgttcagactaa
qPCR L1‐A ggattccacacgtgatcctaa tcctctatgagcagacctgga
qPCR L1‐Gf ctccttggctccgggact caggaaggtggccggttgt
qPCR L1‐ORF1 actcaaagcgaggcaacact ctttgattgttgtgccgatg
qPCR L1‐ORF2 ggagggacatttcattctcatca gctgctcttgtatttggagcataga
NB L1specifc gagtttttgagtctgtatcc ctctccttagtttcagtgg
Chemicals, enzymes and other reagents
Fibronectin Sigma FC010
Puromycin Sigma P8833
Hygromycin Invitrogen 10687010
G418 Invitrogen 10131035
Blasticidin Invitrogen R21001
DMEM Media Sigma D6429‐500ML
Penicillin/Streptomycin Sigma P0781‐100ML
0.05% Trypsin‐EDTA Life Technologies 25300054
PBS1X Life Technologies 10010015
2‐ß‐mercaptoethanol Life Technologies 31350010
FBS Life Technologies 10270‐106
Lipofectamine™ RNAiMAX Transfection Reagent Life Technologies 13778030
Lipofectamine™ 2000 Transfection Reagent Life Technologies 11668019
Lipofectamine™ 3000 Transfection Reagent Life Technologies L3000015
1,6‐Hexanediol Sigma H11807
Sodium Arsenite Sigma S7400
Tris(carboxyethyl)phosphine Sigma 68957
Tris‐HCl AppliChem A2937
NaCl Merck 1.06404.1000
MgCl2 Sigma M8266
IGEPAL CA‐630 Sigma I3021‐50ML
Sodium dodecyl sulfate Sigma L6026
Protease inhibitor cocktails Roche 5892791001
Tween20 Sigma P1379
Coomassie VWR 443283M
Triton‐X Sigma 93443
PIPES Sigma 80635
NotI‐HF NEB R3189S
BamH1‐HF NEB R3136
XhoI‐HF NEB R0146
EcoRI‐HF NEB R0101
Bbs1 NEB R0539
In‐Fusion® Snap Assembly Master Mix Takara 638944
CloneAmp HiFi PCR Premix Takara 639298
Vectashield Vector Laboratories H‐1000
DAPI Sigma D9542
Trizol Life Technologies 15596018
Nick translation kit Abbot Molecular 06J40‐020
Red‐dUTP Enzo Life sciences ENZ 42854
Ribonucleoside Vanadyl Complex NEB S1420S
Trisodium citrate Sigma S4641
DNA Clean & Concentrator‐25 Zymo Research D4033
Clarify™ Western ECL substrate BioRad 1705060
SuperSignal™ West Femto Maximum Sensitivity Substrate Therno Scientific 34094
RQ1 Rnase‐Free DNase kit Promega M6101
GoScript™ Reverse Transcriptase Kit Promega A5001
KAPA SYBR® FAST qPCR Kit Optimized for Light Cycler® 480 KAPA Biosystems, Sigma KK4610
PerfectHybTM Plus Sigma H7033
Dual‐Glow Luciferase Assay kit Promega E2920
Crystal Violet Sigma 1014080025
Software
Prism 9.2.0 GraphPad https://www.graphpad.com
Fiji Fiji ImageJ Nature Methods, 9(7), 676–682
Microsoft Excel Microsoft
ImageLab v6.1.0 Bio‐Rad Laboratories https://www.bio‐rad.com
Other
GloMax® Discover Multimode Microplate Reader Promega
Roche Light Cycler 480 Roche