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. 2000 Mar;182(5):1374–1382. doi: 10.1128/jb.182.5.1374-1382.2000

TABLE 1.

Genetic identificationa of biofilm-defective mutants of S. gordonii Challis

Mutant Allele Locus % of level of wild-type biofilm formationb Genetic function Putative role in biofilm Nucleotide sequence at Tn916 junctionc Accession no. Reference
1 8F9 comD 61.4 Histidine kinase Quorum sensing TTAATTTTATTGTAA U80077 42
2 1C1 PBP 2B gene 9.0 Peptidoglycan biosynthesis Osmoregulation? AAGATTTTTATACTA AF207585 This study
3 11E5L PBP 5 gene 44.3 Peptidoglycan biosynthesis Osmoregulation? ATTATTTTTTAAAGA AF207578 This study
11E5U ATPase gene Cation transport Osmoregulation? CTATATTTTTAAAGA AF207579 This study
4 11B4 glmM 55.5 Peptidoglycan biosynthesis Osmoregulation? GTTATTTTTTTATTA AF207577 This study
5 15B3 bacA 12.6 Peptidoglycan biosynthesis Osmoregulation? TACTTTTATACTTTA AF207587 This study
6 9F8 abpA 16.2 α-Amylase binding Adhesion CTCCTTTTTTATGTA AF035817 51
7 29E5 appC 24.9 Oligopeptide transport Nutrient sensing? AGTTTTTTTTATGTA AF207584 This study
8 4B3 mutT 17.1 DNA replication Unknown TTTATTATTAATTTA AF207581 This study
9 13A12 ytmP 14.6 Unknown Unknown TTATTTTTTTTATTA AF207592 This study
10 8A11 No match 35.3 Unknown Unknown GTATTTTTTACAAAA AF207586 This study
11 6C12 No match 28.2 Unknown Unknown ATAATTTTTTATTTA AF207591 This study
12 14H6 No match 26.1 Unknown Unknown GTTCTTTTTATTCAA AF207582 This study
13 8B8 No match 33.2 Unknown Unknown TGATTTTTTTGAATA AF207583 This study
14 12E11 No match 18.5 Unknown Unknown CTATATTTTTAAAGA AF207576 This study
15 8G2 No match 21.6 Unknown Unknown CGAATTTTAATTTTA AF207580 This study
16 29F1 No match 43.3 Unknown Unknown GTTCTTTTTAATGTA AF207590 This study
17 18D10 No match 22.1 Unknown Unknown GCTATTATTATACCA AF207588 This study
18 11G1 No match 32.1 Unknown Unknown TCGATTTTTTTATTA AF207589 This study
a

Based on DNA homologies with DNA sequences in GenBank. 

b

Wild-type biofilm formation was considered to be 100%. 

c

Fifteen nucleotides upstream of the chromosomal DNA of the Tn916 insertion.