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. Author manuscript; available in PMC: 2023 Mar 2.
Published in final edited form as: Cancer Epidemiol Biomarkers Prev. 2022 Sep 2;31(9):1735–1745. doi: 10.1158/1055-9965.EPI-22-0096

Table 3.

Association of eQTLs for the eight genes in Table 1 with BE, EAC or BE/EAC risk in Bonn GWAS.

Locus Gene #eQTLs Trait #snps in
Bonn
#snps
(P<0.05)a
MinPb Bonn_Pc Hochberg_P
5p15.33 EXOC3 28 BE/EA 26 12 1.69×10−7 1.85×10−5 1.48×10−4
6q14.1 SENP6 51 BE/EA 48 3 3.55×10−4 5.01×10−2 0.189
11q13.4 KRTAP5-8 23 EA 20 2 8.02×10−4 0.162 0.324
12q13.11 ZNF641 4 BE/EA 4 3 4.26×10−3 3.78×10−3 0.026
14q32.31 HSP90AA1 94 BE 89 14 0.012 8.28×10−3 0.049
16q23.1 CFDP1 5 BE/EA 5 1 0.028 0.053 0.189
16q23.1 CHST5 21 BE 20 2 9.81×10−3 0.063 0.189
16q23.1 BCAR1 335 BE 328 11 4.63×10−3 0.464 0.464
a

Number of SNPs with univariate p-value< 0.05 in Bonn data.

b

Minimum univariate p-value in Bonn data.

c

Validation SKAT p-value in Bonn data.