Table 1. The relative bias, coverage, and calibration of estimating Ne, r, M by the SCAR model.
Parameter | Relative error | Coverage | Calibration |
---|---|---|---|
N e | +1.23% | 92 in 100 times | 0.98 |
r | +1.87% | 97 in 100 times | 0.98 |
M | +22.36% | 95 in 100 times | 0.85 |
Except for the parameter being systematically varied, all parameters were fixed at constant values: effective population sizes Ne = 1.0, sample sizes k = 100, genome length L = 10000, recombination rate r = 0.0, migration rate M = 0. For models with migration, migration rates are assumed to be symmetric between two subpopulations