TABLE V.
Standard deviations of conformational parameters determined from H–F model analyses of absorbance, CD, and 2DFS data of (iCy3)2 dimer-labeled ss–dsDNA fork constructs. The optimized values were obtained by minimizing the least squares error function described in Sec. III D, which are shown in Fig. S23 of the supplementary material.
| Construct | σϕ (deg) | σθ (deg) | σR (Å) |
|---|---|---|---|
| +2 | 0.8 | 17 | 0.4 |
| +1 | 1.8 | 7.0 | 0.28 |
| −1 | 1.1 | 4.0 | 0.22 |
| −2 | 1.0 | 5.5 | 0.32 |