Abstract
In December 2014, the National Academies of Sciences convened the first of 2 meetings to discuss the potential risks and benefits of so-called gain-of-function (GOF) research, which was defined by the National Scientific Advisory Board for Biosecurity as research toward increasing the transmissibility, pathogenicity, or ability to evade countermeasures of pathogens with pandemic potential. The symposium was part of a deliberative process undertaken by the United States (US) government to inform in developing guidelines for the safe conduct of GOF research. Participants discussed scientific, technical, and ethical aspects regarding the conduct of research, biosafety measures in the US, and, to a minimal degree, biosafety in other countries. The dearth of information available regarding codified international biosafety requirements and norms, as well as the stringency and verification of their implementation, is particularly troubling as many countries conduct or plan to conduct GOF research. This analysis was conducted to inform policy makers, scientists, and biosafety professionals on a global scale of strengths and potential safety weaknesses by comparing publicly available regulations, laws, guidelines, and published articles describing biosafety processes and measures in other developed countries that may conduct GOF research compared to measures in place in the US. As GOF research has the potential to cause pandemic illness, the findings in this review can be applied to address potential safety gaps by countries with established biosafety capabilities and can serve as a comprehensive guide for countries with nascent or developing biosafety capability working with high-consequence pathogens or contemplating conducting GOF research.
Keywords: biosafety, gain of function, international biosafety, risk analysis, genetically modified material
Introduction and Scope
The National Academies of Sciences (NAS) has convened 2 workshops exploring on the potential risks and benefits of “gain-of-function” (GOF) research, as well as biosafety and biosecurity considerations.1,2 The goal was to help inform the deliberations of the National Science Advisory Board for Biosecurity (NSABB) and the design of a risk and benefit assessment commissioned by the National Institutes of Health (NIH). The workshops and risk and benefit assessment document3 primarily focused on aspects of biosafety and biosecurity in the United States (US). While the workshops also touched on international biosafety practices, few speakers addressed this topic, and due to time constraints and a paucity of data, there was no ability to directly compare biosafety on a global basis. A comprehensive discussion of the state of global biosafety practices, codified biosafety legislation, and implementation could inform US biosafety as well as whether other countries that may perform GOF studies. When considering the human and economic toll resulting from naturally occurring severe acute respiratory syndrome (SARS), Middle East respiratory syndrome (MERS), and influenza viruses, the accidental release into the general population of a virus resulting from GOF research with enhanced communicability, disease severity, or resistance to therapeutics or vaccines could lead to a global pandemic that even the most advanced countries would be ill-prepared to address. Many of these viruses have emerged in countries that understandably need to conduct research on endemic pathogens. That some of these countries have nascent and developing biosafety capabilities creates an urgency to identify best and most effective global safety practices to serve as models and gaps that should be addressed. In this article, we examined how international guidance for biosafety compares to US biosafety guidance, insofar as it informs the conditions under which GOF research may be conducted in countries other than the United States.
Materials and Methods
As most GOF research is conducted in the United States in laboratories operating at biosafety level 3 (BSL-3) with enhancements, this analysis provides a comparison of regulatory biosafety documents, oversight agencies, biosafety practices, and containment requirements for entities operating at BSL-3 as a baseline and then describes enhancements as recommended by the US Department of Agriculture (USDA). The analysis includes documents available on the Internet that were published in English and focused on work at BSL-3 and, where possible, involving GOF experiments. In some cases, sparse country-specific information was available on either biosafety or biosafety specific to GOF research. While not in depth enough to include in comparative tables, that information is included as narrative to provide more context to global biosafety. The authors also contacted colleagues with firsthand knowledge of country-specific practices to add further granularity to the narrative. Biosafety guidance documents (guidelines, laws, regulation) selected for comparison to the recommendations in the United States, Biosafety in Microbiological and Biomedical Laboratories (BMBL), had to be comprehensive in scope, freely available electronically, and published in English.
The following entities’ or nations’ biosafety guidelines were compared to the BMBL:
World Health Organization (WHO)
Great Britain (GB)
Canada (CA)
Australia/New Zealand (AU/NZ)
Singapore (SG)
European Union (EU)
The most widely adopted biosafety guidelines in countries that do not have a codified national biosafety guideline include the WHO Laboratory Biosafety Manual (LBM); BMBL 1,4; Health and Safety Executive (HSE), Management, Design and Operation of Microbiological Containment Laboratories (DOMCL)5; and Control of Substances Hazardous to Health6 (COSHH). The CEN Workshop Agreement 157937 was drafted and approved in 2011 and describes a management system approach for organizations to “identify, monitor and control the laboratory biosafety and biosecurity aspects of its activities” but does not provide actual guidance on tenets of biosafety itself and hence was not comparable to the other documents. In addition, few if any countries involved in its development have formally implemented it as a standard. On the other hand, EU Directive 2000/54/EC8 is a widely adopted biosafety guidance document that serves as a starting point for biosafety and biocontainment policy for EU member states (MS) and hence was included in the analysis.
Results
Biosafety Oversight of US Entities Conducting Work with Naturally Occurring Pathogens and Genetically Modified Materials
The United States has a layered approach to oversight for research with biological select agents and toxins (BSATs) to include highly pathogenic avian influenza virus (HPAIV), 1918 H1N1 pandemic strain, and the virus that causes SARS, the SARS coronavirus (SARS-CoV). At the institutional level, work is reviewed and approved by the entities’ Environmental Health and Safety (EH&S) office, Institutional Biosafety Committee (IBC), and, if animals are involved, the Institutional Animal Care and Use Committee (IACUC). Some municipalities also have local committees that are involved in safety review of entities operating at BSL-3 and biosafety level 4 (BSL-4), several of which have regulatory authority granted at the state or local level. At the top of the hierarchy, entities conducting work with BSATs fall under the regulatory jurisdiction of the Federal Select Agent Program (FSAP),9 administered by the Centers for Disease Control and Prevention (CDC)/Division of Select Agents and Toxins (DSAT) and the Animal and Plant Health Inspection Services (APHIS)/Agriculture Select Agent Services (ASAS). The coronavirus that causes MERS is not currently a select agent, so work with MERS-CoV would not trigger an entity to fall under FSAP jurisdiction.
Work involving genetic modification of an organism also requires approval by the entities’ EH&S and IBC and, if animals are involved, the IACUC. For entities receiving any NIH funding or funding from federal agencies that stipulate that NIH compliance is required, work must be conducted in compliance with the Guidelines for Research Involving Recombinant or Synthetic Nucleic Acid Molecules.10 Certain experiments require review by the NIH Recombinant DNA Advisory Committee (RAC), which may make regulatory recommendations to enhance safety, and approval by the RAC or NIH director may be required before work can proceed. An example of an experiment requiring the director’s approval would be the use of recombinant or synthetic nucleic acids to introduce drug resistance into a microorganism that could harm people or agriculturally important animals or crops. In addition, if the entity receives federal support for life sciences research and conducts an experiment that requires review for dual-use research of concern (DURC), a risk mitigation plan must also be developed and submitted to the grant management official listed on the notice of the grant award or the NIH Program on Biosecurity and Biosafety Policy.11 Examples of experiments that are considered to be DURC include those that increase transmissibility or that alter the host range of pathogens such as highly pathogenic avian influenza virus (Table 1).12
Table 1.
Types of Experiments That Fall Under Dual-Use Research of Concern.
| Enhances the harmful consequences of the agent or toxin |
| Disrupts immunity or the effectiveness of an immunization against the agent or toxin without clinical and/or agricultural justification |
| Confers to the agent or toxin resistance to clinically and/or agriculturally useful prophylactic or therapeutic interventions against that agent or toxin or facilitates their ability to evade detection methodologies |
| Increases the stability, transmissibility, or the ability to disseminate the agent or toxin |
| Alters the host range or tropism of the agent or toxin |
| Enhances the susceptibility of a host population to the agent or toxin |
| Generates or reconstitutes an eradicated or extinct agent or toxina |
Avian influenza virus (highly pathogenic), Bacillus anthracis, botulinum neurotoxin, Burkholderia mallei, Burkholderia pseudomallei, Ebola virus, foot-and-mouth disease virus, Francisella tularensis, Marburg virus, reconstructed 1918 influenza virus, Rinderpest virus, toxin-producing strains of Clostridium botulinum, variola major virus, variola minor virus, and Yersinia pestis.
Overview of Biosafety Oversight Internationally
Outside of the United States, the robustness of biosafety oversight varies significantly from country to country and region to region. Even inside the EU, significant differences in biosafety among countries in the EU have been documented.
A recent inventory made by the European Biosafety Association (EBSA) found that 20 of 27 countries have a body (agency, commission, or committee) regulating or providing advice on the contained use of Genetically Modified Microorganisms (GMM). For the remaining seven countries, no information was available. EU MS [member states] are obliged to implement EU Directives, and all 27 MS have reported to the EU they have adopted and implemented Directive 2000/54/EC. National biosafety regulations and practices derived from EU Directives 2000/54/EC2 and 98/81/EC3 varied from country to country.… There is often no specific biosafety regulation for epizootics except for those microorganisms regulated under the two guidelines mentioned above. Facilities and practices in containment level 3 laboratories throughout the EU are not of a comparable standard, e.g. a large range of different terminologies for “containment level (CL)” were used within the MS.… Moreover, biosafety responsibilities appear often to be attributed to staff in management positions with functional roles that could be in conflict with strict biosafety considerations. Less than half of the respondents were subject to oversight by a biosafety committee. EC legislation on biological agents and GMM is often not specific enough to ensure harmonization of the implementation on the national level. There is a lack of European-wide harmonized practical guidance on how to implement the European Directives on biological agents and GMMs. A few EU Member States have developed their own national guidance based on the EC Directives. In other cases, these gaps are filled by e.g. US Biosafety in Microbiological and Biomedical Laboratories (BMBL) and Canadian guidelines. The varying interpretation of the EU Directives allows different approaches to biosafety and laboratory biosecurity. This and differences in terminology make the exchange of scientists between member states problematic.13
Biosafety in Germany
To begin this discussion, countries with strong biosafety measures are worth considering. European nations with very strong biosafety legislation and oversight bodies include but are not limited to Germany and Switzerland. As most documents are published in German, the authors contacted a colleague who as a German researcher had strict biosafety responsibilities under German law.
In Germany, the GenTSV and GenTG Directives are more stringent and detailed than the EU directives and describe how containment laboratories must be constructed and the safety measures required. The BMBL was a starting point for these directives and additional requirements were added to enhance safety. For example, project leaders are fully responsible for risks and hazards, and as such are given authority by law to enlist all measures needed to reduce risk to staff and the community. Having clear lines of responsibility and the authority to ensure safety has created a culture in which compromises are not made to safety. Both the project leader and biosafety officer are appointed by the government with minimum requirements that they (1) hold a degree in a relevant field, (2) have 3 years of hands-on experience, and (3) complete a course on the content of GenTG and GenTSV. The role of the biosafety officer is to observe project safety and advise project leaders as well as the institution in all questions of biosafety. Typically one biosafety officer is responsible for one or several departments with several project leaders. The annual report of the biosafety officer goes to the institution’s director and the government. All research institutes must be insured to be able to conduct work with pathogens and the facilities must be annually inspected and certified by the government. (Martin Gengenbacher, personal communication, June 2015)
In 2013, following a careful analysis of GOF studies conducted on HPAIV, the Central Committee on Biological Safety (ZKBS), the German advisory body on safety to the Ministry of Health, issued the following position statement: “Genetic engineering operations in which HPAIV (risk group 3) are used as donor or recipient organisms to generate viruses capable of efficient airborne transmission between mammals as well as the handling of viruses generated in this way are to be assigned to biosafety level 4. For operations with wild-type HPAIV aiming at efficient airborne transmissibility between mammals but not involving genetic engineering steps the ZKBS also considers compliance to level 4 safety measures according to the BioStoffV [Biological Agents Ordinance] necessary.”14
Biosafety in Switzerland
The Ordinance on Handling Organisms in Contained Systems,15 a federal law in Switzerland, regulates the handling, transport, and release of organisms, particularly genetically modified, pathogenic, or foreign organisms that are manipulated in contained systems. Special containment features are identified for work with agents in 4 risk groups. It stipulates that due care must be taken by individuals working with organisms to ensure that organisms, their metabolic products, or wastes cannot endanger people, animals, or the environment and requires a risk assessment focused on both the organism and activity. The ordinance references numerous additional safety ordinances that must be adhered to and the authorities charged with approving applications before work can commence. Moreover, the ordinance requires “any person who carries out an activity in contained systems with genetically modified or pathogenic organisms of Classes 3 or 4 must guarantee legal liability: (a) of 20 million francs to cover damage to persons and property; and (b) of 2 million francs to cover damage to the environment.” This measure definitively assigns financial responsibility to the entity working with wild-type and genetically modified pathogens in risk groups 3 and 4 should an incident occur requiring remediation or resulting in harm to a worker, the community, or environment.
According to definitions provided in the ordinance, HPAIV, SARS-CoV and MERS-CoV viruses, and HPAIV modified to have increased transmissibility among mammals clearly fit in risk group 3 or 4. The Ordinance on the Protection of Employees From Dangerous Microorganisms further defines which measures must be taken to protect employees working with microorganisms to include risk assessment and communication, medical surveillance, containment features, authorization from federal entities to conduct work, and other safety measures.16
Biosafety in Asia
In contrast to Germany and Switzerland, biosafety in Asia is often fraught by poor compliance with regulations or their absence. Biosafety capability, practice, and understanding vary greatly among Asian countries and from institution to institution. As Aparna Singh Shah from the World Health Organization Southeast Asia Regional office stated in a recent meeting, “Laboratory facilities vary a lot between countries and the awareness about biosafety is very limited.”17 Construction of biocontainment laboratories in India has increased significantly in recent years from 14 BSL-3 in 2008,18 with a current goal of constructing an additional 160 new laboratories by early 2015 (48 have already been established) and 10 more federal laboratories for work with infectious diseases. During the meeting, the fact emerged that while there are various safety guidelines available in India, there is no strict rule enforcing these guidelines. “Even though we have plenty of exhaustive guidelines, how many people are aware of them, how many are following them—that is the main concern,” said Vasantha Muthuswamy, who is with the Indian Council of Medical Research (ICMR).17
A report issued by WHO in 2008 showed only 2 of 11 countries surveyed in Southeast Asia had any form of biosafety regulations, and 1 had institute-developed requirements; of the 11, only 2 had written laboratory policies and standards.19 The information is dated as some countries now have polices and standards in place, but some are very basic or incomplete and in other instances are not implemented due to cost or lack of training. From country to country and between laboratories, many of the observations, though, are still accurate, and key among them are the following:
safety awareness and biosafety practices degrade from central to peripheral laboratories,
training programs are inadequate,
designated biosafety officers are rare,
biosafety guidelines are not available or fully implemented,
documentation on safety errors and laboratory acquired infections is minimal, and
personal protective equipment (PPE) and immunization of staff is absent or inadequate. (Barbara Johnson, personal observation, June 2015)
In some cases, laboratories referred to as “being BSL-3” in actuality barely meet WHO BSL-2 standards. A number of foreign-built BSL-3 laboratories are nonfunctional due to various reasons, including the followinn:
lack of operating funds or replacement parts,
the inability to balance airflow as some air handling systems had been turned off to reduce costs, and
inappropriate design features, for example, those based on clean room principles (air flows out from the laboratory) as opposed to biocontainment principals (air flows inward to the laboratory).
These overall findings are corroborated by more recent site assessments of 20 BSL-2 and BSL-3 laboratories conducted by the Food and Agriculture Organization (FAO) in 2012 in 9 countries in Southeast Asia. While most laboratories were BSL-2, common major issues cited included “the lack of institutionalized biosafety administration and management, lack of awareness and biosafety practices, improper waste management, workflow, and issues related the biological safety cabinet (BSC) usage and maintenance.”20
The shortfalls noted above are not fully representative of biosafety in Asia. Singapore has made great strides in biosafety in just a decade to include enacting the Biological Agents and Toxins Act (BATA) to address biosafety and security of pathogens; the creation of a Ministry of Health Biosafety Branch, which has oversight of independent annual certification of BSL-3 containment laboratories and safety programs; and emergency preparedness drills that involve the laboratory and local first responders.21 The BATA regulates the possession, use, import, transfer, and transportation of biological agents and toxins that are known to be hazardous to human health, including HPAIV, SARS-CoV, and the recently added MERS-CoV. Laboratories and safety programs are on similar footing to those in countries with well-established biosafety legislation and practices.
BSL-3 laboratories and safety programs in Hong Kong are regularly if not annually certified by independent third-party certifiers using criteria established in the BMBL or AU/NZ BSL-3 standards. Biosafety manuals, policies, and training are rigorously applied; safety equipment is maintained and certified; and PPE is abundant (Barbara Johnson, personal observation, June 2015). In the past, mainland China suffered a number of laboratory-acquired infections as a result of poor infrastructure and maintenance, as well as lack of safety practices and appropriate PPE.22 China has published a national biosafety regulation, but it is available only in Chinese, so it cannot be evaluated for content. The authors contacted a colleague in the United States with knowledge of biocontainment design and construction in China and in discussion were informed, “The construction of BSL-3 and BSL-4 laboratories has increased significantly in China over the past decade, and newly constructed facilities are being built to international biosafety standards similar to those described in the BMBL and AU/NZ” (Joseph H. Wilson, personal communication, July 2015).
“There have been more than 20 high-containment laboratories in China, including one BSL-4 in Wuhan Institute of Virology, Chinese Academy of Sciences, which was constructed with the assistance of the French government. In addition to assisting with providing construction expertise, the staff was also trained and received a certificate of training in France” (Yunxing [Vincent] Hu, personal communication, July 2015). References in the literature and presentations at regional symposia refer to the SARS outbreak and resulting laboratory-acquired infections as the prime motivator for implementing legislation, developing enhanced safety programs, and constructing modern containment laboratories that meet or exceed international guidelines. To avoid the recurrence of biological risks posed by SARS and MERS, China has also learned from the experience of other countries and organizations, with the BMBL being one main knowledge resource. The following publications are relevant to biosafety and identify the year published and entity in charge of the regulation:
State Council of China published Biosafety Management Regulations on Pathogenic Microbiology Laboratory (2004) to guide the management of biosafety laboratories in China.
China National Accreditation Service for Conformity Assessment (CNAS) published the national biosafety standard, Laboratories—General Requirements for Biosafety (GB19489-2004), which describes the requirement for biosafety laboratory (biocontainment) facilities, equipment, and biosafety management. This was updated as GB19489-2008 in 2008.
CNAS published the regulations, Accreditation Criteria for Laboratory Biosafety (CNAS-CL05:2006), which has implemented legislation for inspection and testing of laboratories to ensure biosafety standards are met and safe practices and equipment are in place. This was updated in 2009 as CNAS-CL05:2009.
The Ministry of Construction published Architectural and Technical Code for Biosafety Laboratories (GB50346-2004) and updated it in 2011 as (GB50346-2011).
The Ministry of Agriculture, Ministry of Health, and Ministry of Environment Protection have also published their special biosafety regulations and standards for restricting work with highly pathogenic avian influenza virus to high-level biosafety laboratories (BSL-3 and above) as well as transportation of pathogens.
“Genetically engineered HPAI requires additional safety measures, such as 2 staff members must work together with proper PPE in a negative-pressure laboratory, among other requirements.
In each Chinese biosafety laboratory, there must be a Biosafety Committee. The leader is responsible for organizing risk assessment and establishing standard operating procedures (SOPs). Staff working in BSL-3 must attend training on how to operate equipment correctly to avoid creating an aerosol(s) and how to decontaminate equipment and the laboratory space before working with pathogens. Appropriate primary containment (biosafety cabinets) and PPE are routinely used. BSCs are certified annually by an independent third-party professional. Air from BSL-3 laboratories passes through a building high-efficiency particulate air (HEPA) filter, and all wastes are decontaminated by autoclave, an effluent decontamination system, or a tissue digester, or they are carefully packaged before leaving the facility to be transported to an incinerator (Yunxing [Vincent] Hu, personal communication, July 2015).”
Comparison of Biosafety Guidelines
To provide an overview of international similarities and differences in biosafety guidance, tables were developed using the BMBL as a baseline for overarching biosafety guidelines and the USDA guidance for work with HPAIV, specifically. For transparency, 3 aspects are important to note: (1) although some practices are not listed specifically in a guidance document, they may be adhered to as common sense; (2) the guidelines are not all organized the same way, and some countries provide additional topic matter or requirements that are not listed in the BMBL; and (3) in many countries, numerous additional ordinances, acts, and laws supplement the main guideline, and these are not captured in this study. Differences that are pertinent and may inform enhanced biosafety procedures with wild-type, genetically modified pathogens, and GOF experiments are discussed following each section and in the conclusion.
The International Organization for Standardization (ISO) 2-letter country abbreviations listed in the heading of each table correspond to the following guidelines, laws, or directives:
CA: Canadian Biosafety Standard, Second Edition23
WHO: World Health Organization, Laboratory Biosafety Manual, Third Edition24
GB: United Kingdom Health and Safety Executive, The Management, Design and Operation of Microbiological Containment Laboratories 25
EU: European Union Directive 2000/54/EC on the protection of workers from risks related to exposure to biological agents at work26
AU/NZ: Australian/New Zealand, Safety in Laboratories Part 3: Microbiological Safety and Containment 27
SG: Singapore Ministry of Health, Laboratory Certification Checklist and Biological Agents and Toxins Act28
Standard Microbiological Processes
Standard and special microbiological practices are the first line of defense in protecting workers from pathogens and toxins. Primary and secondary containment barriers are ineffective if not used properly. Table 2 describes standard practices for working in a microbiological laboratory identified in several international resources compared to the US BMBL.
Table 2.
Comparison of International BSL-3 Requirements/Recommendations Regarding Standard Microbiological Practices.
| BMBL BSL-3 Standard Microbiological Practices | CA | WHO | GB | EU | AU/NZ | SG |
|---|---|---|---|---|---|---|
| The laboratory supervisor must enforce the institutional policies that control access to the laboratory. | 1 | ✓ | 1 | 1 | 1 | 1 |
| Persons must wash their hands after working with potentially hazardous materials and before leaving the laboratory. | ✓ | ✓ | ✓ | ✓ | ||
| Eating, drinking, smoking, handling contact lenses, applying cosmetics, and storing food for human consumption must not be permitted in laboratory areas. | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| Food must be stored outside the laboratory area in cabinets or refrigerators designated and used for this purpose. | 2 | ✓ | 2 | 2 | ✓ | ✓ |
| Mouth pipetting is prohibited; mechanical pipetting devices must be used. | ✓ | ✓ | 2 | ✓ | ✓ | |
| Policies for the safe handling of sharps, such as needles, scalpels, pipettes, and broken glassware, must be developed and implemented. | ✓ | 3 | ✓ | 3 | ✓ | 3 |
| Whenever practical, laboratory supervisors should adopt improved engineering and work practice controls that reduce risk of sharps injuries. | ✓ | 3 | ✓ | 3 | 3 | 3 |
| Careful management of needles and other sharps are of primary importance. Needles must not be bent, sheared, broken, recapped, removed from disposable syringes, or otherwise manipulated by hand before disposal. | ✓ | ✓ | 3 | 3 | ✓ | 3 |
| Used disposable needles and syringes must be carefully placed in conveniently located puncture-resistant containers used for sharps disposal. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Nondisposable sharps must be placed in a hard-walled container for transport to a processing area for decontamination, preferably by autoclaving. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Broken glassware must not be handled directly. Instead, it must be removed using a brush and dustpan, tongs, or forceps. | 3 | ✓ | 3 | 3 | ✓ | ✓ |
| Plasticware should be substituted for glassware whenever possible. | ✓ | ✓ | ||||
| Perform all procedures to minimize the creation of splashes and/or aerosols. | ✓ | ✓ | ✓ | ✓ | ||
| Decontaminate work surfaces after completion of work and after any spill or splash of potentially infectious material with appropriate disinfectant. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Decontaminate all cultures, stocks, and other potentially infectious materials before disposal using an effective method. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| A method for decontaminating all laboratory wastes should be available in the facility, preferably within the laboratory (eg, autoclave, chemical disinfection, incineration, or other validated decontamination method). | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| Depending on where the decontamination will be performed, the following methods should be used prior to transport: materials to be decontaminated outside of the immediate laboratory must be placed in a durable, leakproof container and secured for transport. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| A sign incorporating the universal biohazard symbol must be posted at the entrance to the laboratory when infectious agents are present. | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| Posted information must include the laboratory’s biosafety level, the supervisor’s name (or other responsible personnel), telephone number, and required procedures for entering and exiting the laboratory. | ✓ | ✓ | ✓ | ✓ | ||
| Agent information should be posted in accordance with the institutional policy. | ✓ | ✓ | ✓ | ✓ | ||
| An effective integrated pest management program is required. | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| The laboratory supervisor must ensure that laboratory personnel receive appropriate training regarding their duties, the necessary precautions to prevent exposures, and exposure evaluation procedures. | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| Personnel must receive annual updates or additional training when procedural or policy changes occur. | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| Personal health status may affect an individual’s susceptibility to infection and ability to receive immunizations or prophylactic interventions. Therefore, all laboratory personnel and particularly women of child-bearing age should be provided with information regarding immune competence and conditions that may predispose them to infection. | 4 | ✓ | 4 | 4 | ✓ | 4 |
| Individuals having these conditions should be encouraged to self-identify to the institution’s health care provider for appropriate counseling and guidance. | 4 | 4 | 4 | 4 | ✓ | 4 |
- While only the WHO Laboratory Biosafety Manual stipulates that access control must be enforced, this measure is routinely trained and adhered to as part of biosecurity awareness in Canada, England, Germany, Australia, and Singapore.
- Standards refer to use of “Good Microbiological Techniques”; these are universally recognized as GMT.
- Many countries’ biosafety manuals and training programs discuss safe practices and disposal of sharps.
- Many countries’ biosafety manuals and training programs importance of communicating how a person’s health status may predispose him or her to infection or, if pregnant, involve risk to the fetus. In Singapore and Hong Kong, pregnant women are often provided an option to work outside the BSL-3 to reduce the risk to the mother and fetus in the event of an accidental exposure (Barbara Johnson, personal observation, July 2015).
Special Microbiological Processes
Special operating procedures in BSL-3 focus on preventing or mitigating exposures using a combination of medical countermeasures, training and proficiency, primary containment, and strict adherence to decontamination and sterilization of equipment, the laboratory, and materials (Table 3).
Table 3.
Comparison of International BSL-3 Requirements/Recommendations Regarding BSL-3 Special Microbiological Practices.
| BMBL BSL-3 Special Microbiological Practices | CA | WHO | GB | EU | AU/NZ | SG |
|---|---|---|---|---|---|---|
| All persons entering the laboratory must be advised of the potential hazards and meet specific entry/exit requirements. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Laboratory personnel must be provided medical surveillance and offered appropriate immunizations for agents handled or potentially present in the laboratory. | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| Each institution should consider the need for collection and storage of serum samples from at-risk personnel. | ✓ | |||||
| A laboratory-specific biosafety manual must be prepared and adopted as policy. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| The biosafety manual must be available and accessible. | ✓ | ✓ | ✓ | ✓ | ||
| The laboratory supervisor must ensure that laboratory personnel demonstrate proficiency in standard and special microbiological practices before working with BSL-3 agents. | ✓ | ✓ | ✓ | ✓ | ||
| Potentially infectious materials must be placed in a durable, leakproof container during collection, handling, processing, storage, or transport within a facility. | ✓ | ✓ | ✓ | ✓ | ||
| Laboratory equipment should be routinely decontaminated, as well as after spills, splashes, or other potential contamination. | ✓ | ✓ | ✓ | ✓ | ||
| Spills involving infectious materials must be contained, decontaminated, and cleaned up by staff properly trained and equipped to work with infectious material. | ✓ | ✓ | ✓ | |||
| Equipment must be decontaminated before repair, maintenance, or removal from the laboratory. | ✓ | ✓ | ✓ | |||
| Incidents that may result in exposure to infectious materials must be immediately evaluated and treated according to procedures described in the laboratory biosafety manual. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| All such incidents must be reported to the laboratory supervisor. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Medical evaluation, surveillance, and treatment should be provided and appropriate records maintained. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Animals and plants not associated with the work being performed must not be permitted in the laboratory. | ✓ | |||||
| All procedures involving the manipulation of infectious materials must be conducted within a BSC or other physical containment devices. | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| No work with open vessels is conducted on the bench. | ✓ | ✓ | ✓ | ✓ | ||
| When a procedure cannot be performed within a BSC, a combination of personal protective equipment and other containment devices, such as a centrifuge safety cup or sealed rotor, must be used. | ✓ | ✓ | ✓ | ✓ |
AU/NZ, Australia/New Zealand; BMBL, Biosafety in Microbiological and Biomedical Laboratories; BSC, biological safety cabinet; BSL-3, biosafety level 3; CA, Canada; EU, European Union; GB, Great Britain; SG, Singapore.
While the EU directive does not address many of these practices, they are specified in other country-specific ordinances and regulatory documents with examples previously cited in Germany and Switzerland. Many documents from EU MS are available electronically but are not translated in English, hence preventing their inclusion in this analysis. In Singapore, provisions are in place in SOPs and biosafety manuals at BSL-3 laboratories to comply with each special procedure listed in Table 2. Australia and New Zealand have additional special requirements, which include having plans in place for emergency egress from BSL-3 and preventing entry by people involved with cleaning and repairs until potentially contaminated laboratory surfaces have been decontaminated and authorization is obtained from the laboratory supervisor or the safety officer.
Absent from the BMBL BSL-3 checklist, although present in the BMBL text, is information on risk assessment. Risk assessment is thoroughly described in the GB guideline along with staff training and supervision, roles and responsibilities, and emergency planning. In the CA standard, special attention is given to recordkeeping and documentation, the training program, and overarching biosafety program management.
Safety Equipment
The purpose of safety equipment used in the BSL-3 laboratory is to provide a boundary between the worker and the pathogen, whether this equipment is in the form of primary containment (BSC) or PPE (Table 4). The AU/NZ standard provides supplemental information, such as instructions for doffing used PPE, while the GB standard addresses respiratory protection in greater depth.
Table 4.
Comparison of International BSL-3 Requirements/Recommendations Regarding BSL-3 Safety Equipment.a
| BMBL BSL-3 Safety Equipment | CA | WHO | GB | EU | AU/NZ | SG |
|---|---|---|---|---|---|---|
| All procedures involving the manipulation of infectious materials must be conducted within a BSC (preferably Class II or Class III) or other physical containment devices. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Workers in the laboratory wear protective laboratory clothing with a solid front, such as tie-back or wrap-around gowns, scrub suits, or coveralls. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Protective clothing is not worn outside of the laboratory. | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| Reusable clothing is decontaminated with appropriate disinfectant before being laundered. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Clothing is changed when contaminated. | ✓ | ✓ | ||||
| Eye and face protection (goggles, mask, face shield, or other splatter guard) is used for anticipated splashes or sprays of infectious or other hazardous materials. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Eye and face protection must be disposed of with other contaminated laboratory waste or decontaminated before reuse. | ✓ | ✓ | ✓ | |||
| Persons who wear contact lenses in laboratories must also wear eye protection. | ||||||
| Gloves must be worn to protect hands from exposure to hazardous materials. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Glove selection should be based on an appropriate risk assessment. | 1 | ✓ | ✓ | 1 | 1 | |
| Alternatives to latex gloves should be available. | 1 | 1 | 1 | 1 | 1 | |
| Gloves must not be worn outside the laboratory. | ✓ | ✓ | ✓ | ✓ | ||
| Workers should change gloves when contaminated, integrity has been compromised, or when otherwise necessary. | ||||||
| Workers should wear 2 pairs of gloves when appropriate. | ✓ | ✓ | ✓ | |||
| Workers should remove gloves and wash hands when work with hazardous materials has been completed and before leaving the laboratory. | ✓ | ✓ | ✓ | ✓ | ||
| Workers should not wash or reuse disposable gloves. | ||||||
| Workers should dispose of used gloves with other contaminated laboratory waste. | ✓ | ✓ | ||||
| Handwashing protocols must be rigorously followed. | ✓ | ✓ | ✓ | |||
| Eye, face, and respiratory protection must be used in rooms containing infected animals. | ✓ | ✓ |
AU/NZ, Australia/New Zealand; BMBL, Biosafety in Microbiological and Biomedical Laboratories; BSC, biological safety cabinet; BSL-3, biosafety level 3; CA, Canada; EU, European Union; GB, Great Britain; SG, Singapore.
1. Many countries have moved toward the use of nitrile gloves as they are more durable than latex and have moved away from latex because of allergic reactions.
A practice that has been observed in a number of entities in Asia is the spraying of gloves with 70% alcohol or the decontaminating agent of choice for the pathogen. This practice may lead to more rapid permeation of material through the outer glove, and resistance to permeation varies between manufacturers and glove type. In some entities, there is resistance to change the practice as it is seen as a way to keep the work cleaner and serves to decontaminate unseen micro-splashes or unanticipated settling of aerosolized droplets. In addition, some guidelines make reference to a sink at the containment barrier (as opposed to the laboratory door), meaning inner gloves may be worn out of the laboratory and hands are not washed until reaching the containment barrier. This factor, coupled with the possibility of permeation through the outer glove, raises concern should unnoticed outer glove contamination occur and a contaminated inner glove is used to open doors and move through the containment area. Recommendations have been made to substitute more frequent glove changes for the use of decontaminants on gloves and, if gloves are to be worn outside the laboratory, to don new inner gloves immediately prior to exiting the laboratory (Barbara Johnson, personal observation, July 2015).
Laboratory Facilities
There is a high degree of similarity in facility requirements among the guidelines, particularly with regard to separation from other areas, restriction of access, ease of cleaning, ability to be sealed for gas decontamination, availability of a change room, the placement of BSCs, ability to monitor and verify airflow, methods for waste decontamination, the verification of performance of engineering systems, and other aspects related to secondary containment (Table 5). Some surprising differences included variation in the requirement for doors to be self-closing, location of the hand washing sink, and a definitive and strict statement that, under failure conditions, the airflow will not be reversed (with a definition of precisely what reversal actually means).
Table 5.
Comparison of International BSL-3 Requirements/Recommendations Regarding BSL-3 Laboratory Facilities.
| BMBL BSL-3 Laboratory Facilities | CA | WHO | GB | EU | AU/NZ | SG |
|---|---|---|---|---|---|---|
| Laboratory doors must be self-closing and have locks in accordance with the institutional policies. | ✓ | ✓ | ✓ | |||
| The laboratory must be separated from areas that are open to unrestricted traffic flow within the building. | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| Laboratory access is restricted. | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| Access to the laboratory is through 2 self-closing doors. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| A clothing change room (anteroom) may be included in the passageway between the 2 self-closing doors. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| The sink must be hands-free or automatically operated. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| The sink should be located near the exit door. | ✓ | ✓ | ✓ | ✓ | ||
| If the laboratory is segregated into different laboratories, a sink must also be available for handwashing in each zone. | ||||||
| Additional sinks may be required as determined by the risk assessment. | ||||||
| The laboratory must be designed so that it can be easily cleaned and decontaminated. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Carpets and rugs are not permitted. | ||||||
| Seams, floors, walls, and ceiling surfaces should be sealed. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Spaces around doors and ventilation openings should be capable of being sealed to facilitate space decontamination. | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| Floors must be slip resistant, impervious to liquids, and resistant to chemicals. | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| Consideration should be given to the installation of seamless, sealed, resilient, or poured floors, with integral cove bases. | ✓ | ✓ | ✓ | |||
| Walls should be constructed to produce a sealed smooth finish that can be easily cleaned and decontaminated. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Ceilings should be constructed, sealed, and finished in the same general manner as walls. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Decontamination of the entire laboratory should be considered when there has been gross contamination of the space, significant changes in laboratory usage, for major renovations, or maintenance shutdowns. | ✓ | ✓ | ✓ | ✓ | ||
| Selection of the appropriate materials and methods used to decontaminate the laboratory must be based on the risk assessment of the biological agents in use. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Laboratory furniture must be capable of supporting anticipated loads and uses. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Spaces between benches, cabinets, and equipment must be accessible for cleaning. | ✓ | ✓ | ✓ | |||
| Benchtops must be impervious to water and resistant to heat, organic solvents, acids, alkalis, and other chemicals. | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| Chairs used in laboratory work must be covered with a nonporous material that can be easily cleaned and decontaminated with appropriate disinfectant. | ✓ | ✓ | ||||
| All windows in the laboratory must be sealed. | ✓ | ✓ | ✓ | ✓ | ||
| BSCs must be installed so that fluctuations of the room air supply and exhaust do not interfere with proper operations. | ✓ | ✓ | ✓ | ✓ | ||
| BSCs should be located away from doors, heavily traveled laboratory areas, and other possible airflow disruptions. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Vacuum lines must be protected with HEPA filters or their equivalent. | ✓ | ✓ | ✓ | |||
| Filters must be replaced as needed. | ✓ | ✓ | ||||
| Liquid disinfectant traps may be required. | ✓ | ✓ | ✓ | ✓ | ||
| An eyewash station must be readily available in the laboratory. | ✓ | ✓ | ✓ | |||
| A ducted air ventilation system is required. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| This system must provide sustained directional airflow by drawing air into the laboratory from “clean” areas toward “potentially contaminated” areas. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| The laboratory shall be designed such that under failure conditions, the airflow will not be reversed. | ✓ | ✓ | ✓ | |||
| Laboratory personnel must be able to verify directional air flow. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| A visual monitoring device that confirms directional air flow must be provided at the laboratory entry. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Audible alarms should be considered to notify personnel of air flow disruption. | ✓ | ✓ | ✓ | ✓ | ||
| The laboratory exhaust air must not recirculate to any other area of the building. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| The laboratory building exhaust air should be dispersed away from occupied areas and from building air intake locations or the exhaust air must be HEPA filtered. | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ |
| HEPA filter housings should have gas-tight isolation dampers, decontamination ports, and/or bag-in/bag-out (with appropriate decontamination procedures) capability. The HEPA filter housing should allow for leak testing of each filter and assembly. The filters and the housing should be certified at least annually. | ✓ | ✓ | ✓ | ✓ | ||
| HEPA-filtered exhaust air from a Class II BSC can be safely recirculated into the laboratory environment if the cabinet is tested and certified at least annually and operated according to the manufacturer’s recommendations. BSCs can also be connected to the laboratory exhaust system by either a thimble (canopy) connection or a direct (hard) connection. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Provisions to ensure proper safety cabinet performance and air system operation must be verified. | ✓ | ✓ | ✓ | ✓ | ||
| BSCs should be certified at least annually to ensure correct performance. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Class III BSCs must be directly (hard) connected up through the second exhaust HEPA filter of the cabinet. Supply air must be provided in such a manner that prevents positive pressurization of the cabinet. | ||||||
| A method for decontaminating all laboratory wastes should be available in the facility, preferably within the laboratory (eg, autoclave, chemical disinfection, incineration, or other validated decontamination method). | ✓ | ✓ | ✓ | ✓ | ✓ | |
| Equipment that may produce infectious aerosols must be contained in primary barrier devices that exhaust air through HEPA filtration or other equivalent technology before being discharged into the laboratory. These HEPA filters should be tested and/or replaced at least annually. | ✓ | ✓ | ✓ | ✓ | ||
| Facility design consideration should be given to means of decontaminating large pieces of equipment before removal from the laboratory. | ✓ | ✓ | ✓ | |||
| Enhanced environmental and personal protection may be required by the agent summary statement, risk assessment, or applicable local, state, or federal regulations. These laboratory enhancements may include, for example, one or more of the following: an anteroom for clean storage of equipment and supplies with dress-in, shower-out capabilities; gas tight dampers to facilitate laboratory isolation; final HEPA filtration of the laboratory exhaust air; laboratory effluent decontamination; and advanced access control devices such as biometrics. | ✓ | ✓ | ✓ | ✓ | ||
| The BSL-3 facility design, operational parameters, and procedures must be verified and documented prior to operation. | ✓ | ✓ | ✓ | ✓ | ||
| Facilities must be reverified and documented at least annually. | ✓ | ✓ | ✓ | ✓ |
AU/NZ, Australia/New Zealand; BMBL, Biosafety in Microbiological and Biomedical Laboratories; BSC, biological safety cabinet; BSL-3, biosafety level 3; CA, Canada; EU, European Union; GB, Great Britain; HEPA, high-efficiency particulate air; SG, Singapore.
In comparison to the BMBL, the AU/NZ standard contains far more prescriptive information regarding engineering performance, calibration of equipment, presence of viewing panels in doors, construction of walls and ceiling to withstand cracking during air pressurization extremes (upon supply/exhaust fan failures), and having adequate access to services for maintenance. The guidance document from GB points out access to natural light should be provided, validation of key equipment/systems should be repeated on a regular basis, and prescriptive pressurization values need to be provided. Furthermore, this guidance provides charts for calculating the time required for removing log concentrations of particles from the air (90%, 99%, 99.9%, 99.99%) should there be a spill outside primary containment, based on the number of air changes per hour, and a chart of potential airborne particles based on spill size and organism concentration. The CA guidance document dedicates an entire chapter to performance and verification tests for facilities and systems, as well as requirements of the liquid effluent decontamination system in the event it is required for BSL-3 operations per a risk assessment.
Work with HPAIV
The USDA document that specifically addresses work with HPAIV is used as a starting point for considerations of requirements with HPAIV GOF work as well. A comparison of international guidance documents with the recently released USDA guidance document suggests established international practices (along with the BMBL) helped inform the development of the USDA document (Table 6).
Table 6.
Comparison of International Requirements/Recommendations in Relation to USDA Guidance for HPAIV.34
| USDA Guidance for Work with HPAIV | CA | WHO | GB | EU | AU/NZ | SG |
|---|---|---|---|---|---|---|
| Laboratory work with HPAIV conducted in BSL-4 and ABSL-4 laboratories does not require additional provisions. | ✓ | ✓ | NA; no BSL-4 | |||
| Animals that are housed loosely on the floor or in open caging systems and have been infected with HPAIV must be contained in a BSL-3Ag facility. | ✓ | ✓ | ||||
| BSL-3Ag provision: Entities must implement a written (quarantine) policy for staff and visitors that restricts and prevents them from contact with susceptible avian species for a minimum of 5 days after last engaging work with the virus, to include avian wildlife, pet birds, backyard poultry, fair birds, commercial poultry operations, and zoos. The policy must be read and signed by staff to ensure compliance. | ||||||
| In vitro laboratory work with HPAIV conducted in BSL-3 laboratories in the United States requires the following provisions: | ||||||
| Mandatory HEPA filtration on the exhaust system, which should also have sealed ductwork system from the containment barrier to the filter. Supply HEPA filtration is not necessary if directional airflow is maintained inward through entry doors. The supply and exhaust air handling systems must be interlocked. Ideally, these are independent air supply and exhaust systems. It is not required that air handling systems are independent, but they must be isolated from other areas. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| A gown-in, shower-out procedure is used to enforce a change of street clothing to reduce the risk of fomite transmission. Ideally, personal showers are located at the interface of containment/noncontainment zones. | ✓ | ✓ | ||||
| Liquid effluents originating from laboratories should be collected locally and chemically disinfected or heat treated, or collected and processed in a central effluent decontamination system before being released into the local sanitary system. The decontamination of shower and toilet effluents is not a requirement, provided appropriate practices and procedures are in place for primary containment. | ✓ | ✓ | ✓ | |||
| Personal clothing is removed and laboratory clothing donned prior to entering the laboratory. Attire donned for gowning should include: (1) disposable hood or head cover; (2) protective eyewear (eg, safety glasses); (3) respiratory protection; (4) disposable double gloves; (5) disposable Tyvek gown or coveralls; and (6) and disposable shoe covers. | ✓ | ✓ | ✓ | |||
| The same quarantine policy applies as above. | ||||||
| Work conducted in ABSL-3 laboratories requires the following provisions: | ||||||
| The same air handling system and HEPA filtration policy applies as above. | ✓ | ✓ | ✓ | ✓ | ✓ | |
| The same liquid effluent decontamination policy applies as above. | ✓ | ✓ | ✓ | |||
| The same gowning and shower-out policy applies as above. | ✓ | ✓ | ||||
| The same quarantine policy applies as above. | ||||||
| Animals infected with HPAIV must be placed in appropriate biocontainment units for animal housing, creating containment at the cage level. Primary biocontainment housing may be a containment cage or rack system, flexible film isolator, or glove box. Caging must be ventilated and the exhaust air HEPA filtered in all instances. Static micro-isolators are not considered primary biocontainment housing in this case. | ✓ | ✓ | ✓ | ✓ | ||
| Ideally, personal showers are located at the interface of containment/noncontainment zones. | ✓ | ✓ | ||||
| All animal tissues, carcasses, and bedding originating from the animal room must be decontaminated by an effective and validated method (eg, autoclave) before leaving the containment barrier. There should be an appropriate final method of disposal (eg, incineration). | ✓ | ✓ | ✓ | ✓ | ✓ | |
ABSL-4, animal biosafety level 4; AU/NZ, Australia/New Zealand; BMBL, Biosafety in Microbiological and Biomedical Laboratories; BSC, biological safety cabinet; BSL-3, biosafety level 3; BSL-3Ag, biosafety level 3 agriculture; BSL-4, biosafety level 4; CA, Canada; EU, European Union; GB, Great Britain; HEPA, high-efficiency particulate air; HPAIV, highly pathogenic avian influenza virus; NA, not applicable; SG, Singapore; USDA, US Department of Agriculture.
Where available, specific examples of how entities are conducting work with HPAIV or genetically modified strains of the virus are presented below for comparison to the USDA recommendations. Whether other countries implement a written (quarantine) policy for staff and visitors preventing contact with susceptible avian species after working with HPAIV, and for how many days after working with the virus the policy applies, is unknown.
No guidance documents exist for WHO in the context of HPAI precautions for research (just clinical specimens, and this guidance is not applicable). The EU directive, “On the Contained Use of Genetically Modified Micro-Organisms,” provides a good starting place for countries to build specific legislation and informs on safety regarding GMM.29 It does not, however, provide the granularity to compare with the guidance document provided by the USDA. While documentation from the World Organisation for Animal Health (OIE)30 is in close agreement with the BMBL and provides useful information regarding elements of BSL-3 laboratory design and operation, much of information is synopsized, so it cannot be directly compared, and no information on GOF or work with HPAI is provided. For these reasons, the 2015 OIE Terrestrial Manual was not included in the comparison. The AU Gene Technology Act of 200031 provides regulatory safety oversight but not safety specifics regarding how to conduct work. Presumably, information would be derived from the AU/NZ biosafety guidance document referenced in the tables and safety enhancements made per a risk assessment.
New biosafety standards, specifically addressing GOF will be promulgated by Canada in late 2015 (Richard Pilon, personal communication, July 2015).
In Great Britain, the Department for Environmental Food and Rural Affairs published the Animal Pathogens Guidance on Controls in January 2015, which describes biosafety features for working with HPAIV type A viruses H5 or H7 subtype with multiple basic amino acids at the cleavage site of hemagglutinin or genetically altered forms of the virus. Specifically, if animals are infected with these pathogens, the work is to be conducted per the Special Animal Pathogens Order (SAPO) in SAPO 4 biocontainment with enhanced practices and engineering controls (US BSL-3 enhanced). This document also provides that work on specified animal pathogens must be kept separate at all times from other work in the laboratory.32
While Dutch biosafety guidelines were not available for review in English, a number of recently published papers describe animal BSL-3 (ABSL-3) enhanced biosafety measures (ABSL-3+) required to conduct work in the Netherlands with genetically modified HPAIV in animals (intentionally generated, mammalian transmissible strains). A slightly edited summary of the biosafety provisions at Erasmus Medical Center was described as including the following:
The ABSL-3+ facility consists of a negative pressurized (–30 Pa) laboratory in which all in vivo and in vitro experimental work is carried out in class 3 isolators or class 3 biosafety cabinets, which are also negative pressurized (< –200 Pa). Air released from the class 3 units is filtered twice by HEPA filters and then leaves via the facility ventilation system, again via double HEPA filters. Only authorized personnel that have received the appropriate training can access the ABSL-3+ facility. For animal handling in the facilities, personnel always work in pairs. The facility is secured by procedures recognized as appropriate by the institutional biosafety officers and facility management at Erasmus MC and Dutch and United States government inspectors.… The facilities, personnel, and procedures are further inspected by the US Centers for Disease Control and Prevention (CDC) every 3 years in agreement with the US select agent regulations for oversees laboratories and by the Dutch government (VROM inspection)…. Although the laboratory is considered “clean” because all experiments are conducted in closed class 3 cabinets and isolators, special personal protective equipment, including laboratory suits, gloves and FFP3 (filtering facepiece with 5% leakage) facemasks, is used and all personnel are offered seasonal and prototype A/H5N1 influenza vaccines with informed consent.… All personnel are given basic training in laboratory safety under BSL-2 conditions. Employees are trained for a further 3 months under standard BSL-3 conditions, supervised by highly experienced personnel. Following initial BSL-3 training and a period of independent work under BSL-3 conditions, employees are trained for a further 3 months in the ABSL-3+ facility, again under the constant supervision of highly experienced personnel. These training programs consist of hands-on work under supervision, following theory components on facilities, procedures and safety drills. Upon completion of the supervised training period, the supervisors judge whether trainees fulfill all requirements for working independently in the facilities. Annual refreshment training sessions on biosafety and biosecurity are provided by the principal investigators, biosafety officers, and facility managers.… Antiviral drugs (oseltamivir and zanamivir) are directly available. Erasmus MC has isolation hospital rooms (negative pressure rooms with interlocks) with trained nursing and medical staff to be used in case of serious incidents and to quarantine the infected individual to prevent further dissemination of the pathogen.33
Conclusion
Part of the goal of this analysis was to compare US and international biosafety capabilities, program maturity, and practices to better understand in a qualitative manner where gaps in biosafety may exist and introduce risk while conducting research at BSL-3 with naturally occurring or genetically modified pathogens. One predictable finding was that several developing or middle-income countries do not have a means or sustainable means to safely conduct work with these pathogens at BSL-3. When measured in the context of norms described in the WHO LBM, US BMBL, and other internationally accepted and referenced biosafety guidance documents, many countries lack any number/combination of these components required to safety operate at BSL-3: facilities (secondary containment), equipment (primary containment and PPE), supplies, critical infrastructure (reliable power, clean water), site-applicable biosafety training, staffing (dedicated biosafety personnel), and the funding to operate and maintain containment facilities. This shortcoming poses a potential national, regional, and global risk as countries where disease is endemic must conduct diagnostic work and scientific research on diseases with human and animal health implications to protect their populations.
This analysis also provides a comparison of several biosafety guidelines published by organizations with a well-established history of biosafety policy making and practice. There are many similarities among these documents, and often, differences are more due to the fact that granularity (ie, specific location of a hand washing sink) in the BMBL is not found in other country-specific directives, ordinances, and acts. A similarity among guidance documents is that they clearly identify lines of authority for ensuring national biosafety requirements or recommendations are implemented when working with BSL-3 pathogens. Some countries, however, provide additional useful guidance by describing roles, responsibilities, and qualifications required by principal investigators and biosafety professionals, something that is a useful pillar in building an organizational culture of safety.
Finding documents (in English) directly comparable to the USDA recommendations for work with HPAIV was difficult. However, this difficulty was not reflective of the fact that few countries have specific guidance on work with GMM, as many have comprehensive frameworks for oversight and safety principles. The biggest difference is that the USDA guidance is very prescriptive in recommendations, while the approach of other countries appears more performance based and will default to implementing safety based on a risk/hazard assessment-mitigation plan. In many cases, these plans require government review by groups of individuals with the collective ability to truly understand and assess the risk/hazard and adequacy of the plan. Some variation between countries exists in assigning the A/BSL for conducting work that increases mammalian aerosol transmission of HPAIV (through genetic manipulation or natural selectin) as recommendations range from A/BSL-3 enhanced to A/BSL-4. A few require entities conducting such work to secure an insurance policy that could make funds available should an infection or release negatively affect worker, community, animal, or environmental health.
The comparisons in this review of guidelines, information provided by biosafety colleagues during phone interviews, and publicly available reports demonstrate substantial differences in global biosafety capacity. GOF research has the potential to answer important questions that may prevent a future devastating global pandemic but also carries the risk of triggering such a pandemic. The aim of this review is that its findings may be applied to further strengthen biosafety in countries with established capabilities and serve as a comprehensive guide for countries with nascent or developing biosafety capability working with high-consequence pathogens or contemplating conducting GOF research.
Acknowledgments
The authors thank Sakari Ishetiar (Gryphon Scientific), Kelly Fennington and Chris Viggiani (NIH), and Rona Hirschberg (contractor to the NIH) for their editorial assistance.
Declaration of Conflicting Interests
The author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.
Funding
The author(s) disclosed receipt of the following financial support for the research, authorship, and/or publication of this article: This work was funded under contract HHSN263201500002C, awarded to Gryphon Scientific by the National Institutes of Health. The views and conclusions contained in this document are those of the authors and should not be interpreted as necessarily representing the official policies, either expressed or implied, of the National Institutes of Health or the US government.
References
- 1. National Academy of Sciences. Potential Risks and Benefits of Gain-of-Function Research: Summary of a Workshop. Washington, DC: National Academies Press; 2015. [PubMed] [Google Scholar]
- 2. National Academy of Sciences. Gain-of-Function Research: The Second Symposium. 2016. http://dels.nas.edu/Upcoming-Event/Gain-Function-Research-Second/AUTO-9-61-70-Q
- 3. Casagrande, Rocco, et al. Risk and benefit analysis of gain of function research. Report for the NIH Office of Policy. 2016. http://www.gryphonscientific.com/GOF
- 4. US Department of Health and Human Services. Biosafety in Microbiological and Biomedical Laboratories. 5th ed. 2009. http://www.cdc.gov/biosafety/publications/bmbl5/BMBL.pdf
- 5. Health and Safety Executive. The management, design and operation of microbiological containment laboratories. Advisory Committee on Dangerous Pathogens; 2001. https://www.phe-protectionservices.org.uk/cms/assets/gfx/content/resource_2505cs8c1b6fa97c.pdf
- 6. Health and Safety Executive. Control of substances hazardous to health. 2002 as amended. http://www.hse.gov.uk/pUbns/priced/l5.pdf
- 7. CEN Workshop Agreement CWA 15793. Laboratory biorisk management. 2011. http://www.uab.cat/doc/CWA15793_2011
- 8. The European Parliament and of the Council. Directive 2000/54/EC. On the protection of workers from risks related to exposure to biological agents at work. 2000. http://www.biosafety.be/PDF/2000_54.pdf
- 9. Department of Health and Human Services and US Department of Agriculture. Federal Select Agent Program. http://www.selectagents.gov/
- 10. National Institutes of Health. Guidelines for research involving recombinant or synthetic nucleic acid molecules. http://osp.od.nih.gov/office-biotechnology-activities/biosafety/nih-guidelines
- 11. National Institutes of Health. Dual use research of concern: a companion guide. 2014. http://www.phe.gov/s3/dualuse/Documents/durc-companion-guide.pdf
- 12. US Government. United States government policy for institutional oversight of life sciences dual use research of concern. September 24, 2014. http://www.phe.gov/s3/dualuse
- 13. National Academy of Sciences and National Research Council. Biosecurity Challenges of the Global Expansion of High Containment Biological Laboratories. Washington, DC: National Academies Press; 2012. [PubMed] [Google Scholar]
- 14. Central Committee on Biological Safety (ZKBS). General position statement of the ZKBS on the classification of genetic engineering operations with highly pathogenic avian influenza A viruses (HPAIV) which possess the potential for efficient airborne transmission between mammals. March 2013. Ref. No. 45310.0108. http://www.bvl.bund.de/SharedDocs/Downloads/06_Gentechnik/ZKBS/02_Allgemeine_Stellungnahmen_englisch/09_viruses/HPAIV.pdf?__blob=publicationFile&v=6
- 15. Swiss Federal Council. Ordinance on handling organisms in contained systems. June 2014. https://www.admin.ch/opc/en/classified-compilation/20100803/index.html
- 16. Swiss Federal Council. Ordinance on the protection of employees from dangerous microorganisms. November 1999. http://www.bag.admin.ch/themen/medizin/00708/01974/index.html?
- 17. Sandhya. Indo-U.S. workshop on biosafety, infections and disease: a report. 2015. http://www.indiabioscience.org/blogs/indo-us-workshop-biosafety-infections-and-disease-report
- 18. World Health Organization. Biosafety and biosecurity in health laboratories: report of the regional workshop, Pune, India 8-11 July 2008. http://www.searo.who.int/entity/antimicrobial_resistance/documents/BCT_Reports_SEA-HLM-398.pdf?ua=1
- 19. World Health Organization (WHO). Biosafety and Biosecurity in Health Laboratories. Geneva, Switzerland: WHO; 2008. [Google Scholar]
- 20. Food and Agriculture Organization of the United Nations. Regional Animal Health Laboratory Technical Advisory Group Meeting, Yogyakarta, Indonesia, 29–30 October 2013. http://www.fao.org/fileadmin/templates/rap/files/meetings/2013/131029-report-labtag.pdf
- 21. Singapore Ministry of Health. Biological Agents and Toxins Act. 2005. http://www.biosafety.moh.gov.sg/home/
- 22. Hvistendahl M. Chinese university fires administrators, offers compensation after lab accident. Science Insider. 2011. http://news.sciencemag.org/asia/2011/09/chinese-university-fires-administrators-offers-compensation-after-lab-accident
- 23. Public Health Agency of Canada and the Canadian Food Inspection Agency. Canadian Biosafety Standard. 2nd ed. 2015. http://canadianbiosafetystandards.collaboration.gc.ca/
- 24. World Health Organization (WHO). Laboratory Biosafety Manual. Geneva, Switzerland: WHO; 2004. [Google Scholar]
- 25. Health and Safety Executive, Management, 2001. http://www.hse.gov.uk/pUbns/priced/microbiologyiac.pdf .
- 26. European Parliament, Directive, 2000. http://www.biosafety.be/PDF/2000_54.pdf
- 27. Australian/New Zealand Joint Technical Committee CH-02. Safety in Laboratories Part 3: Microbiological Safety and Containment. AS/NZ Standard 2243.3:2010. https://law.resource.org/pub/nz/ibr/as-nzs.2243.3.2010.pdf
- 28. Singapore Ministry of Health. MOH BSL-3 Facility Certification Checklist. August 2015. https://www.moh.gov.sg/content/dam/moh_web/BioSafety/docs/Certification%20checklist.pdf
- 29. European Parliament and of the Council. Directive 2009/41/EC. On the contained use of genetically modified microorganisms. May 6, 2009. http://eur-lex.europa.eu/legal-content/EN/TXT/PDF/?uri=CELEX:32009L0041&from=EN
- 30. World Organisation for Animal Health (OIE). OIE Terrestrial Manual. 2015. Chapter 1.1.4. Biosafety and biosecurity: standard for managing biological risk in the veterinary laboratory and animal facilities. http://www.oie.int/fileadmin/Home/eng/Health_standards/tahm/1.01.04_BIOSAFETY_BIOSECURITY.pdf
- 31. Office of Parliamentary Counsel, Canberra, Australia. Gene Technology Act 2000 No. 169, 2000 as amended (2014). https://www.comlaw.gov.au/Details/C2014C00587
- 32. Department for Environment Food and Rural Affairs. Animal pathogens guidance on controls. January 2015. https://www.gov.uk/government/uploads/system/uploads/attachment_data/file/400360/animal-pathogens-guidance-controls.pdf
- 33. Herfst S, Schrauwen EJA, Linster M, et al. Supplementary materials for: airborne transmission of influenza a/h5n1 virus between ferrets. Science. 2012;336:1534. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 34. US Department of Agriculture (USDA). Animal and Plant Health Inspection Service (APHIS) Agricultural Select Agent Program. Guidelines for avian influenza viruses. November 2011. http://www.selectagents.gov/resources/Guidelines_for_Avian_Influenza_Viruses_2011-11-4.pdf
