Table 4.
System | Hbond Type | Acceptor | Donor | Occupancy | Distance (Å) | Angle (degrees) |
---|---|---|---|---|---|---|
WT SP-D●Trimannose | Glu333-Arg343 | Glu333@OE1 | Arg343@NE | 0.13 | 2.84 | 157.52 |
Glu333@OE2 | Arg343@NE | 0.12 | 2.84 | 156.02 | ||
Glu333@OE1 | Arg343@NH1 | 0.25 | 2.80 | 158.00 | ||
Glu333@OE1 | Arg343@NH2 | 0.04 | 2.82 | 156.05 | ||
Glu333@OE2 | Arg343@NH1 | 0.27 | 2.80 | 157.57 | ||
Glu333@OE2 | Arg343@NH2 | 0.05 | 2.81 | 156.04 | ||
Total | 0.87 | |||||
Glu333-Trimannose | Glu333@OE1 | Man3@O2 | 0.05 | 2.63 | 162.02 | |
Glu333@OE2 | Man3@O2 | 0.05 | 2.64 | 162.18 | ||
Glu333@OE1 | Man3@O3 | 0.15 | 2.67 | 163.82 | ||
Glu333@OE2 | Man3@O3 | 0.18 | 2.67 | 163.63 | ||
Total | 0.43 | |||||
Asp325Ala SP-D●Trimannose | Glu333-Arg343 | Glu333@OE1 | Arg343@NH1 | 0.16 | 2.81 | 156.57 |
Glu333@OE2 | Arg343@NH1 | 0.12 | 2.81 | 156.60 | ||
Glu333@OE1 | Arg343@NH2 | 0.11 | 2.82 | 151.39 | ||
Glu333@OE2 | Arg343@NH2 | 0.08 | 2.81 | 150.55 | ||
Glu333@OE1 | Arg343@NE | 0.05 | 2.83 | 153.50 | ||
Glu333@OE2 | Arg343@NE | 0.19 | 2.83 | 154.53 | ||
total | 0.70 | |||||
Glu333-Trimannose | Glu333@OE1 | Man3@O2 | 0.19 | 2.65 | 162.57 | |
Glu333@OE2 | Man3@O2 | 0.15 | 2.68 | 161.59 | ||
Glu333@OE1 | Man3@O3 | 0.09 | 2.70 | 163.67 | ||
Glu333@OE2 | Man3@O3 | 0.05 | 2.71 | 163.73 | ||
total | 0.49 | |||||
Arg343Val SP-D●Trimannose | Glu333-Val343 | No Hydrogen bonds | ||||
Glu333-Trimannose | Glu333@OE1 | Man3@O2 | 0.04 | 2.71 | 156.56 | |
Glu333@OE2 | Man3@O2 | 0.04 | 2.72 | 156.49 | ||
Glu333@OE1 | Man3@O3 | 0.48 | 2.67 | 163.77 | ||
Glu333@OE2 | Man3@O3 | 0.43 | 2.67 | 163.68 | ||
total | 1.00 | |||||
DM SP-D●Trimannose | Glu333-Val343 | No Hydrogen bonds | ||||
Glu333-Trimannose | Glu333@OE1 | Man3@O2 | 0.23 | 2.72 | 157.01 | |
Glu333@OE2 | Man3@O2 | 0.20 | 2.73 | 156.31 | ||
Glu333@OE1 | Man3@O3 | 0.41 | 2.68 | 164.30 | ||
Glu333@OE2 | Man3@O3 | 0.35 | 2.68 | 164.24 | ||
total | 1.19 |