Table 1.
Genome assembly statistics of P. occultum with other Mucoromycota genomes used in this study
|
Genome |
Assembly size (Mb) |
No. of scaffolds |
Scaffold N50 |
Largest scaffold (kb) |
Repeat % |
busco completeness % using V4 |
G+C (mol%) |
Gene density per 10 kb |
|---|---|---|---|---|---|---|---|---|
|
Paraglomus occultum |
44 |
4722 |
160 |
104.458 |
12.78 |
92.2 |
36.77 |
2.276 |
|
Geosiphon pyriformis |
129 |
795 |
703 |
2733.91 |
64.35 |
93.2 |
29.25 |
1.893 |
|
Gigaspora rosea V1.0 |
597.95 |
7526 |
734 |
1204.75 |
63.44 |
96.3 |
28.81 |
0.550 |
|
Rhizophagus cerebriforme DAOM227022 V1.0 |
136.89 |
2592 |
266 |
709.02 |
24.77 |
97.2 |
26.55 |
1.574 |
|
Rhizophagus irregularis DAOM 197198V2.0 |
136.80 |
1123 |
129 |
1375.86 |
26.38 |
96.6 |
27.53 |
1.913 |
|
Diversispora versiformis strain IT104 |
147 |
731 |
434 |
2010.39 |
43.6 |
95.5 |
25.1 |
1.810 |
|
Rhizopus microsporus ATCC 11559 V1 |
25.97 |
131 |
8 |
2782.17 |
4.68 |
95.7 |
37.48 |
4.610 |
|
Mucor circinelloides CBS 277.49 V2.0 |
36.59 |
26 |
4 |
6050.25 |
20.38 |
95.3 |
42.17 |
3.194 |
|
Phycomyces blakesleenus NRRL1555 V2.0 |
53.94 |
80 |
11 |
4452.46 |
9.74 |
95.7 |
35.78 |
3.062 |
|
Mortierella elongata AG-77 |
49.86 |
473 |
31 |
1526.29 |
4.63 |
99 |
48.05 |
3.002 |