Table 2.
Gene comparison efficiency statistics.
| Samples | Mapped Reads | Unique Mapped Reads | Multiple Map Reads |
|---|---|---|---|
| Control-1 | 67,898,715 (95.98%) | 66,065,506 (93.39%) | 1,833,209 (2.59%) |
| Control-2 | 62,849,152 (96.34%) | 61,097,600 (93.66%) | 1,751,552 (2.69%) |
| Control-3 | 60,714,671 (96.27%) | 59,081,017 (93.68%) | 1,633,654 (2.59%) |
| E. coli-1 | 46,168,875 (95.96%) | 44,891,836 (93.31%) | 1,277,039 (2.65%) |
| E. coli-2 | 49,843,598 (96.11%) | 48,508,765 (93.54%) | 1,334,833 (2.57%) |
| E. coli-3 | 43,776,016 (96.19%) | 42,624,022 (93.66%) | 1,151,994 (2.53%) |
| pBD2-1 | 39,790,781 (96.01%) | 38,760,294 (93.53%) | 1,030,487 (2.49%) |
| pBD2-2 | 46,057,704 (96.38%) | 44,834,945 (93.82%) | 1,222,759 (2.56%) |
| pBD2-3 | 40,692,378 (95.84%) | 39,483,201 (92.99%) | 1,209,177 (2.85%) |
Notes: Control, E. coli and pBD2 indicate the IPEC-J2 in the control, E. coli and E. coli +pBD2 groups, and 1–3 indicate the three replicates, respectively.