TABLE 2.
Properties of fimH mutants
Lesion locationa (nt) | No. of isolatesb | Morphologic classc | Representative fimH allele (strain no.) | Type of lesion, amino acid change if missense (amino acid position)d | Phenotype or other relevant properties |
---|---|---|---|---|---|
56 | 5 | I | fimH241 (ORN160) | Missense, Ala (−3)→asp | Amino acid change in signal sequence near processing site |
62 | 3e | II | fimH236 (ORN164) | Missense, Ser (−1)→Leu | Amino acid change in signal sequence at processing site |
194 | 1 | I | fimH244 (ORN165) | Missense, Cys (44)→Tyr | Amino acid change in first of four cysteine residues |
236 | 1 | I | fimH205 (ORN157) | Missense, Leu (58)→Arg | Amino acid change produces a conditional erythrocyte agglutination phenotype |
291 | 1f | III | fimH208 (ORN158) | Frameshift, deletion of 1 nucleotide | Frameshift lesion predicts a truncated protein approximately 40% of normal size |
Nucleotide (nt) residue altered. Refer to Fig. 1 for coordinates. The parental fimH allele is identical to that of the fully sequenced E. coli K-12 strain MG1655, referenced in the text.
Number of isolates refers to the number of independently isolated fimH mutants having the same mutation by DNA sequencing and recombination analysis. Five identical mutant alleles were found at position 56 (fimH241, fimH229, fimH222, fimH247, and fimH246 [13]). Three identical alleles were found at position 62 (fimH336, fimH204, and fimH218 [13]).
Morphologic class refers to the classes observed by Harris et al. (13). Class I mutants have normal-appearing pili, class II mutants have longer than normal pili, and class III mutants have fewer and longer pili. See text for additional details.
See Fig. 1 for base pair changes, lesion location, and amino acid position.
Originally, only one mutant having the representative allele (fimH236) was scored as being a class II mutant (13). Retrospective analysis of available electron micrographs revealed that at least one of the two additional mutants was simply overlooked in the original screen (data not shown).
In addition to strain ORN158, one additional mutant was scored as being a class III mutant in our original phenotypic screening (13). Upon examination of Southern blots using DNA encoding fimH as a probe, and PCR sequencing of the chromosomal fimH allele in this mutant, it was concluded that there had been an aberrant introduction of this allele into the chromosome (our unpublished observations).