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. 2022 Sep 7;84:104247. doi: 10.1016/j.ebiom.2022.104247

Figure 3.

Figure 3:

Real-time metagenomics data analysis and pathogen characterisation. a) Real-time data analysis and pathogen identification at 20 min sequencing. Thirty-one CSF samples were diagnosed as positive after a 20-min sequencing run, including 16 S. pneumoniae, seven N. meningitidis, six H. influenzae, one S. agalactiae, and one VZV. b) Total generated data and pathogen identification after a two-hour sequencing run. A total of 47/52 CSFs diagnosed positive after two hours RTM, included 20 S. pneumoniae, nine N. meningitidis, seven H. influenzae, three S. agalactiae, three Herpes Simplex Virus, two L. monocytogenes, one case each of E. coli and S. aureus, and one VZV.