TABLE 3.
Similarities of products of putative ORFs to protein sequences in the database detected using BlastP
ORF, size (amino acids) | Protein homologue, size (amino acids) | Degree of similaritya | Function of similar protein | Organism | Accession no. |
---|---|---|---|---|---|
SepA, 2,376 | TcbA, 2,504 | 34/50, 41–1628; 57/72, 1630–2374 | Insecticidal toxin complex protein | P. luminescens | AF047457 |
TcdA, 2,516 | 38/55, 33–1289; 40/54, 1499–1625; 58/71, 1630–2374 | Insecticidal toxin complex protein | P. luminescens | AF188483 | |
TcaB, 1,189 | 29/50, 936–1198; 38/54, 1625–2374 | Insecticidal toxin complex protein | P. luminescens | AF046867 | |
TccB, 1,565 | 31/51, 930–1204; 36/51, 1575–2373 | Insecticidal toxin complex protein | P. luminescens | AF047028 | |
TcaA, 1,095 | 36/56, 94–183; 18/39, 435–928 | Insecticidal toxin complex protein | P. luminescens | AF046867 | |
TccA, 965 | 27/45, 115–280 | Insecticidal toxin complex protein | P. luminescens | AF047028 | |
SepB, 1,428 | TcaC, 1,485 | 49/63, 1–1263; 64/78, 1270–1421 | Insecticidal toxin complex protein | P. luminescens | AF046867 |
SpvB, 591 | 40/52, 9–365 | Salmonella virulence protein | Salmonella serovar Typhimurium | S22664 | |
SepC, 938 | TccC, 1,043 | 53/66, 3–782 | Insecticidal toxin complex protein | P. luminescens | AF047028 |
Gene sc2h4.02, 2,183 | 23/34, 68–677 | Hypothetical wall-associated protein | S. coelicolor A3(2) | CAA20596.1 | |
WapA, 2,334 | 20/36, 48–625; 22/34, 255–677 | Wall-associated protein precursor | B. subtilis | Q07833 | |
Orf 774, 334 | 21/34, 181–684 | Hypothetical wall-associated protein | C. burnetii | CAA75841 | |
Rhs core, 1,420 | 21/36, 35–300; 21/35, 237–677 | Rhs core protein | E. coli | ACC32471 | |
ORF3, 144 | Gene 15, 263 | 45/62, 1–139 | Morphogenesis protein of bacteriophage B103 | B. subtilis | CAA67646.1 |
Gene 19, 146 | 46/61, 1–143 | Phage P22 lysozyme EC3.2.1.17 | Salmonella | Q37896 | |
ORF4, 191 | Gp55, 181 | 28/42, 1–184 | Bacteriophage N15 protein | E. coli | AAC19092.1 |
ORF5, 236 | Tnp1294, 312 | 50/69, 18651–18391; 55/74, 18934–18752 | Transposase | E. coli | S49612 |
ORF6, 310 | IS91 | 39/58, 18675–18394; 39/56, 18934–18725; 30/48, 18391–18164 | IS91 transposase | E. coli | S23782 |
Amino acid similarity (percent identity/percent similarity over the indicated range of amino acid residues) in relation to sequence generated in this study. Percent identities and similarities were calculated in relation to the deduced gene products of the sequenced ORF. Similarities were considered potentially significant if the BlastP score exceeded e−5.