TABLE 3.
Database homologies
| Protein of unknown function | No. of amino acids | B. subtilis paralog(s) of interest (% identity/no. of amino acids) | Homologous protein(s) of known or predicted function (% identity/no. of amino acids) | Reference for functionally known protein |
|---|---|---|---|---|
| YvbA | 90 | Staphylococcus xylosus ArsR (40/87) | 51 | |
| YqgE | 430 | Staphylococcus aureus NorA (22/304) | 68 | |
| YheH | 673 | Homo sapiens MDR1 (33/517) | 5 | |
| Pasteurella haemolytica HylB (31/509) | 59 | |||
| Lactococcus lactis LcnC (27/532) | 58 | |||
| YhdP | 444 | YrkA (62/434) | Rickettsia typhi TylC (33/214) | 48 |
| YhdT (60/430) | S. enterica serovar Typhimurium CorC (27/277) | 12 | ||
| YugS (60/427) | S. enterica serovar Typhimurium CorB (24/224) | 12 | ||
| YqhB (59/433) | ||||
| YueF | 369 | E. coli PerM (27/315) | ||
| YsdB | 130 | None | ||
| YqfD | 398 | Bacillus megaterium SpoIV (43/395) | 66 | |
| YodE | 303 | YdfO (48/296) | Sphingomonas paucimobilis LinE (30/306) | 35 |
| YkcA (37/313) | Sphingomonas chlorophenolica PcpA (28/299) | 42 | ||
| YulE | 424 | E. coli RhaA (58/411) | 36 | |
| YshB | 177 | None | ||
| YshD | 785 | MutS (24/520) | 13 | |
| YopH | 178 | None | ||
| YitG | 422 | Blt (23/407) | 1 | |
| Bmr (22/383) | ||||
| YjdE | 315 | Pmi (56/316) | Streptococcus mutans ManA (53/311) | 54 |
| YdhS (55/313) | ||||
| YogA | 329 | Streptomyces cinnamonensis CCR (26/364) | 31 | |
| Pseudomonas syringae Cfa8 (25/356) | 49 | |||
| YngK | 510 | None | ||
| YtxJ | 108 | None | ||
| YwpH | 113 | SSB (63/106) |