TLC analysis of products synthesized by M. tuberculosis (A) or M. smegmatis (B) cytosol in the presence of [14C]IPP and GPP. Prenyl diphosphate synthase activity was assayed in mixtures containing 50 mM MOPS (pH 7.9), 10 mM sodium orthovanadate, 5 mM MgCl2, 2.5 mM dithiothreitol, 0.3% Triton X-100, 100 μM allylic diphosphate, 30 μM [14C]IPP, and 300 μg of protein in a final volume of 200 μl. Reaction mixtures were incubated at 37°C for 60 min (A) or 10 min (B). The reactions were stopped by the addition of 1 ml of water saturated with NaCl, and the product was extracted with n-butanol saturated with water. The resulting prenyl diphosphates were dephosphorylated with potato acid phosphatase, and equivalent amounts of radioactivity derived from dephosphorylated products were analyzed on LKC18F TLC plates developed in methanol-acetone (8:2, vol/vol). Radioactive spots were located with a System 200 Imaging Scanner (Bioscan Inc.), and standard polyprenols were located with an anisaldehyde spray reagent (9).