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. 2022 Sep 14;33(6):2221–2241. doi: 10.1007/s11224-022-02056-1

Table 3.

Contributing energies of the potential leads estimated from molecular Mechanics/Poisson-Boltzmann Surface Area (MM-PBSA) calculations. The energy values are stated in average with their standard deviations

Compound name van der Waals energy (kJ/mol) Electrostatic energy (kJ/mol) Polar solvation energy (kJ/mol) Nonpolar solvation energy (kJ/mol) Binding free energy
Quercitrin  − 197.532 ± 20.459  − 107.316 ± 28.560 229.403 ± 40.315  − 19.562 ± 1.354  − 95.007 ± 22.816
Teucrol  − 182.988 ± 21.019  − 50.614 ± 22.080 128.654 ± 27.686  − 16.986 ± 1.193  − 121.935 ± 25.297
Malvinidin-3-arabinoside  − 158.093 ± 33.267  − 70.333 ± 36.322 113.350 ± 45.573  − 15.654 ± 1.857  − 130.731 ± 35.454
N-E-caffeoyl tyramine  − 188.480 ± 12.010  − 46.255 ± 15.189 92.678 ± 23.135  − 14.939 ± 1.065  − 156.996 ± 19.169
ZINC000085967772  − 244.543 ± 24.925  − 66.744 ± 16.519 158.873 ± 34.790  − 20.478 ± 1.494  − 172.892 ± 24.913
Pinobanksin_3-(E)-caffeate  − 220.695 ± 17.948  − 72.870 ± 25.096 122.875 ± 34.294  − 18.529 ± 1.343  − 189.219 ± 25.602
Abyssinone IV  − 172.210 ± 31.278  − 39.115 ± 16.107 74.818 ± 33.845  − 16.395 ± 2.274  − 152.902 ± 27.063