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. 2022 Aug 22;11(9):e00054-22. doi: 10.1128/mra.00054-22

TABLE 1.

General features of the complete genome sequence of Flavobacterium sediminilitoris YSM-43T

Genomic feature Value % of total Description
Genome size (bp) 3,913,692
DNA GC (%) 29.38
No. of DNA scaffolds 1
Total no. of genes 3,599
 No of CDSs 3,537
 No of rRNAs 9
  No of 16S rRNAs 3
  No of 23S rRNAs 3
  No of 5S rRNAs 3
 No of tRNAs 50
 No of ncRNAs 3
No. of genes assigned to COGs
 Total 2,694
 M 275 8.94 Cell wall/membrane/envelope biogenesis
 E 190 6.18 Amino acid transport and metabolism
 J 176 5.72 Translation, ribosomal structure, and biogenesis
 K 162 5.27 Transcription
 H 141 4.58 Coenzyme transport and metabolism
 L 141 4.58 Replication, recombination, and repair
 O 138 4.49 Posttranslational modification, protein turnover, and chaperones
 C 131 4.26 Energy production and conversion
 T 120 3.9 Signal transduction mechanisms
 P 107 3.48 Inorganic ion transport and metabolism
 I 86 2.8 Lipid transport and metabolism
 G 74 2.41 Carbohydrate transport and metabolism
 F 68 2.21 Nucleotide transport and metabolism
 V 55 1.79 Defense mechanisms
 Q 45 1.46 Secondary metabolite biosynthesis, transport, and catabolism
 U 43 1.4 Intracellular trafficking, secretion, and vesicular transport
 D 27 0.88 Cell cycle control, cell division, and chromosome partitioning
 N 17 0.55 Cell motility
 W 3 0.1 Extracellular structures
 A 1 0.03 RNA processing and modification
 B 1 0.03 Chromatin structure and dynamics
 Z 1 0.03 Cytoskeleton
 S 692 22.5 Function unknown
 UCa 382 12.42 Not in COGs
a

UC, uncharacterized.