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. 2022 Sep 2;13:976669. doi: 10.3389/fpls.2022.976669

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Copyright © 2022 Ma, Wang, Yang, Dong, Yang, Chen, Zhou, Chen, Liu, Zhang, Edwards and Zhao.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Haplotype analysis and domestication analysis of OsCPS1. (A) The percentage of 36-bp deletion in indica, japonica and rufipogon. (B) Shoot length of OsCPS1-L type accessions and OsCPS1-S type accessions. (C) Plant height of OsCPS1-L type accessions and OsCPS1-S type accessions. (D) Geographical distribution analysis of OsCPS1-L type accessions and OsCPS1-S type accessions in the world. (E) π (nucleotide diversity) ratio in genome region surrounding OsCPS1. Blue bar means π ratio between indica and rufipogon, red bar means π ratio between japonica and rufipogon. (F) F_ST (fixation index) in the region surrounding OsCPS1 among rufipogen, indica and japonica.