Table 1.
Primer | Primer sequence (5’-3’) | Target Gene | Tm (°C) | Length | References |
---|---|---|---|---|---|
rpoA_F | GCAAATCTGGCATTGGCCCT | rpoA | 61.6 | 195 | (Pearson and Mobley, 2008) |
rpoA_R | TAGGGCGCTCATCTTCTTCCG | 61.9 | |||
umoC_F | CACAAGCCAGCAGTACTTCA | umoC | 58.1 | 144 | (Aygül et al., 2019) |
umoC-R | GTGACTCTATCGCGGCTAAA | 57.5 | |||
flhC_F | CGCACATCAGCCTGCAAGT | flhC | 61.3 | 90 | (Aygül et al., 2019) |
flhC_R | GCAGGATTGGCGGAAAGTT | 58.7 | |||
flhD_F | TGCCCGTTTCTTTGTAGCAGA | flhD | 60 | 148 | (Pearson and Mobley, 2008) |
flhD_R | CCGGTTTGAAGACAGCGAAA | 59 | |||
flhDC_F | CGCACATCAGCCTGCAAGT | flhDC | 61.2 | 90 | (Wang et al., 2008) |
flhDC_R | GCAGGATTGGCGGAAAGTT | 58 | |||
mrpA_F | ATTGCGGGCTCTGCATTA | mrpA | 61 | 113 | This study |
mrpA_R | GGAATACGTTGAGCACCTGA | 61 | |||
mrpJ_F | AACGTAAAGAGCTGGGTTAT | mrpJ | 54.3 | 81 | (Aygül et al., 2019) |
mrpJ_R | GTTCATAGCGAGAAAACTGT | 53.6 | |||
rcsB_F | GCGCTTATTTGCCGAAGGTTT | rcsB | 60.4 | 107 | (Pearson and Mobley, 2008) |
rcsB_R | CACCGAGCTTCATCATGGCTG | 61.6 | |||
rcsD_F | TCCGTATCGTACTTCCATACC | rcsD | 56.4 | 86 | (Aygül et al., 2019) |
rcsD_R | GGCGAGTTTTGCAGTTATACC | 57.6 | |||
speB_F | GCGGGATCAAGGCAATCAAT | speB | 68.9 | 126 | (Aygül et al., 2019) |
speB_R | CTTTACTGTCTTGGATGCTGC | 57.2 | |||
glnA-F | CGCCCAATGGTAAAAGGAGG | glnA | 59 | 103 | (Aygül et al., 2019) |
glnA_R | CCACTAAGCCCATCTCTTCCA | 59 | |||
luxS_F | ACGATGAAAACACCCTCTGG | luxS | 57.8 | 125 | This study |
luxS_R | CGCATGAAACCCGCAAATAAG | 58.8 |