. 2000 Nov;182(22):6472–6481. doi: 10.1128/jb.182.22.6472-6481.2000

TABLE 2.

Characterization of the genes of phage P22

Gene	From^a	To^a	Strand	Mass (kDa)	Function	Related phage sequences^b	BlastP e value	% Identity
gtrC	17	1474	−	55.2	O-antigen conversion; glucosyl transferase
gtrB	1464	2396	−	35.1	O-antigen conversion; bactoprenol glucosyl transferase	AAB72133; SfV orf5	e-139	87
					O-antigen conversion; bactoprenol glucosyl transferase	AAC39272; SfII bgt	e-139	87
						AF056939; SfX gtrB	e-138	85
gtrA	2393	2755	−	13.5	O-antigen conversion; translocase (flippase)	AF056939; SfX gtrA	3e-44	78
						AAB72134; SfV orf6	7e-43	77
						AAC39271; SfII orf2	2e-42	77
int	3104	4267	−	44.8	Integrase	AAB72135; SfV int	0	89
						INTD_ECOLI, DLP12 int	e-162	71
						F157835_38; APSE-1 int	e-149	63
xis	4144	4494	−	12.8	Excisionase	AAB72136; SfV xis	9e-52	69
eac	4497	5132	−	23.9	Unknown
eag	5233	5412	−	6.6	Unknown
eaa	5509	6462	−	35.7	Unknown	BAA84359; VT2-Sa orf76	2e-22	26
						F125520_78; 933W L0140	2e-22	28
eai	6466	6660	−	7.0	Unknown
ead	6657	7367	−	26.8	Unknown	VE22_LAMBD; λ ea22	1e-13	31
eaf	7247	7642	−	15.2	Unknown
eae	7715	8212	−	18.1	Unknown
ORF-56	8200	8370	−	6.6	Unknown
abc2	8381	8674	−	11.6	Anti-RecBCD protein
abc1	8721	9005	−	10.9	Anti-RecBCD protein
erf	9005	9622	−	23.0	Recombination protein	AAD04639; H-19B erf	4e-79	74
						AAA92165; c2 e15	6e-17	32
arf	9619	9762	−	5.5	Recombination protein
kil	9752	9940	−	6.9	Unknown
c3	9921	10079	−	5.7	Regulatory protein	RPC3_LAMBD; λ cIII	4e-8	59
						F125520_17; 933W cIII	3e-7	57
17	10165	10476	−	12.2	Superinfection exclusion	AAD04642; H-19B gp17	6e-50	84
ORF-67	10624	10827	−	7.8	Unknown
ORF-78	10827	11063	−	8.6	Unknown
ral	11100	11294	−	7.4	Antirestriction protein	VRAL_LAMBD; λ ral	9e-22	73
						VRAL_BPPH3; φ21 ral	9e-22	62
sieB	11509	12087	+	22.4	Superinfection exclusion
24	12108	12410	−	11.0	Antitermination	CAA63998; L 24	5e-35	73
						CAA60872; ES18 24	2e-31	64
c2	12764	13414	−	24.1	Repressor	CAA63999; L c2	9e-57	53
						S32822; 434 cI	1e-51	49
						RPC1_LAMBD; λ cI	1e-27	35
						BAA84306; VT2-Sa cI	8e-26	33
cro	13495	13680	+	6.8	Antirepressor	CAB39982; 21 cro	3e-28	98
c1	13787	14065	+	10.2	Transcriptional activator	RPC2_BP434; 434 cII	5e-19	48
						RPC2_LAMBD; λ cII	6e-19	48
ORF-48	14100	14246	+	5.8	Unknown	S42399; HKO22	4e-17	85
18	14239	15054	+	30.6	DNA replication	CAA60876; ES18 gp18	6e-24	29
						AAD04647; H-19B gpO	4e-22	29
						AF125520_28; 933W gpO	6e-22	28
12	15051	16427	+	50.1	DNA replication (helicase)	CAA09719; P1 ban	2e-55	32
						BAA84310; VT2-Sa P	2e-48	30
						S43527; HKO22 P	1e-40	27
ninB	16501	16938	+	16.4	Unknown	CAB39988; 21 ninB	4e-77	97
						Y146_LAMBD; λ orf146	1e-76	96
ninD	16935	17108	+	7.0	Unknown	Y57_LAMBD; λ orf57	7e-23	73
ninE	17075	17251	+	72.0	Unknown	BAA84316; VT2-Sa orf33	2e-29	95
						CAB39989; 21 ninE	9e-29	93
						AAD04650; H-19B orf58	1e-28	97
						NINE_LAMBD; λ ninE	8e-28	92
ninX	17248	17586	+	12.5	Unknown
ninF	17579	17755	+	6.4	Unknown	AAD04651; H-19B nin orf-58-B	4e-26	95
						Y56_LAMBD; λ orf56	5e-21	79
						CAB39990; 21 ninF	2e-20	79
ninG	17748	18359	+	24	Unknown	CAB39991; 21 ninG	e-112	94
						Y204_LAMBD; λ orf204	e-112	94
						CAB39297; 933W orf15	e-105	89
						AAD04653; H-19B nin orf-204	e-101	87
ninY	18356	18580	+	8.6	Unknown
ninH	18577	18780	+	7.9	Unknown	Q1BP0L; λ nin	8e-19	61
						CAB39298; 933W orf16	2e-18	64
						AAD04654; H-19B nin orf-59	2e-18	61
ninZ	18761	18940	+	6.9	Unknown
23	18937	19560	+	22.3	Antitermination	CAA09704; PS34 gp23	e-112	95
						REGQ_LAMBD; λ Q	e-112	95
						S28977; HKO22 Q	e-112	95
13	19995	20321	+	11.7	Lysis (holin)	VLYS_LAMBD; λ S	2e-47	89
19	20302	20742	+	16.1	Lysozyme	CAA47617.1; ES18 gp19	2e-75	97
						AF157835_13; APSE-1 P13	4e-26	43
15	20877	21176	+	11.0	Endopeptidase (Rz homologue)	CAA09707; PS34 gp15	4e-49	66
						CAA09702; PS3 gp15	7e-46	60
						BAA84330.1; V2T-Sa Rz	3e-22	35
						AF125520_47; 933W Rz	5e-21	33
ORF-201	21326	21931	+	22.7	Unknown
ORF-80	22765	23007	+	9.0	Unknown
3	23212	23700	+	18.6	Terminase (small subunit)	CAA09708; PS34 gp3	2e-90	96
						CAA09703; PS3 gp3	5e-89	95
						TERM_BPLP7; LP7 gp3	2e-88	94
2	23678	25177	+	57.6	Terminase (large subunit)	VG2_BPLP7; LP7 gp2	0	75
1	25177	27354	+	82.7	Portal protein	AF157835_19; APSE-1 P19	1e-96	32
8	27368	28279	+	33.6	Scaffolding protein
5	28279	29571	+	46.8	Coat protein
ORF-69	29610	29819	+	7.7	Unknown (Y7K7_BPP22)
4	29803	30303	+	18.0	DNA stabilization protein
10	30263	31681	+	52.5	Packaged DNA stabilization protein	AF157835_28; APSE-1 P28	e-174	60
26	31685	32386	+	24.7	Packaged DNA stabilization protein
14	32386	32841	+	17.2	Unknown
7	32844	33533	+	23.4	DNA transfer protein	AF157835_32; APSE-1 P32	1e-61	53
20	33544	34959	+	50.1	DNA transfer protein
16	34959	36788	+	64.4	DNA transfer protein	AF157835_35; APSE-1 P35	0.0	64
sieA	36811	37305	−	18.7	Superinfection exclusion
ORF-59	37715	37894	−	6.4	Unknown
mnt	37994	38245	−	9.7	Regulatory protein
arc	38336	38497	+	6.2	Repressor
ant	38566	39468	+	34.6	Antirepressor	BAA84318.1; V2T-Sa ant	9e-46	39
						AF125520_46; 933W ant	2e-27	27
9	39679	41682	+	71.9	Tailspike protein (endorhamnosidase)	AF128887_1; Sf6	9e-44	28
						AF157835_36; APSE-1 P36	3e-33	20

Nucleotide coordinates corresponding to the first nucleotide of the initiation codon and the last nucleotide of the termination codon.

Where similar sequences exist, the GenBank accession number is followed by the phage name and the gene designation.