Deposited data |
|
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-012 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-034 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-036 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-039 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-052 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-056 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-015 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-020 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-021 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-023 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-028 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-032 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-055 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-053 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-054 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-059 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-006 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-014 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-051 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-057 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-058 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-001 |
Single-cell RNA seq data |
The Human Pancreas Analysis Program - HPAP |
HPAP-007 |
|
Software and algorithms |
|
STAR 2.7.3a |
https://github.com/alexdobin/STAR |
|
Custom python and R software used to generate results |
https://github.com/EBosi/scPanBetaT2D |
scPanBetaT2D |
|
Other |
|
Human reference genome with ENSEMBL annotation |
http://ftp.ensembl.org/pub/grch37/ |
GRCh37 (release 87) |
GO Biological Process gene sets |
mSigDB 7.4 |
c5.go.bp.v7.2.symbols.gmt |
GO Molecular Function gene sets |
mSigDB 7.4 |
c5.go.mf.v7.2.symbols.gmt |
GO Cellular Component gene sets |
mSigDB 7.4 |
c5.go.cc.v7.2.symbols.gmt |
Reactome gene sets |
mSigDB 7.4 |
c2.cp.reactome.v7.2.symbols.gmt |
KEGG gene sets |
mSigDB 7.4 |
c2.cp.kegg.v7.2.symbols.gmt |
mSigDB Hallmark gene sets |
mSigDB 7.4 |
h.all.v7.2.symbols.gmt |