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. 2022 Sep 3;25(10):105056. doi: 10.1016/j.isci.2022.105056
REAGENT or RESOURCE SOURCE IDENTIFIER
Deposited data

Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-012
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-034
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-036
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-039
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-052
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-056
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-015
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-020
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-021
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-023
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-028
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-032
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-055
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-053
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-054
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-059
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-006
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-014
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-051
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-057
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-058
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-001
Single-cell RNA seq data The Human Pancreas Analysis Program - HPAP HPAP-007

Software and algorithms

STAR 2.7.3a https://github.com/alexdobin/STAR
Custom python and R software used to generate results https://github.com/EBosi/scPanBetaT2D scPanBetaT2D

Other

Human reference genome with ENSEMBL annotation http://ftp.ensembl.org/pub/grch37/ GRCh37 (release 87)
GO Biological Process gene sets mSigDB 7.4 c5.go.bp.v7.2.symbols.gmt
GO Molecular Function gene sets mSigDB 7.4 c5.go.mf.v7.2.symbols.gmt
GO Cellular Component gene sets mSigDB 7.4 c5.go.cc.v7.2.symbols.gmt
Reactome gene sets mSigDB 7.4 c2.cp.reactome.v7.2.symbols.gmt
KEGG gene sets mSigDB 7.4 c2.cp.kegg.v7.2.symbols.gmt
mSigDB Hallmark gene sets mSigDB 7.4 h.all.v7.2.symbols.gmt