TABLE 2.
DXPase-A residue | DXPase-B residue | Transketolase residue | Function | Reference(s) |
---|---|---|---|---|
H80 | H79 | H69 | Stabilization of reaction intermediate; binds C-1 hydroxyl of donor substrate | 53 |
H49 | H48 | H30 | Acid-base catalyst (proton acceptor or donor) | 53 |
H258 | H257 | H263 | Acid-base catalyst (proton acceptor or donor) | 53 |
D152 | D151 | D157 | Metal binding (side chain) | 42 |
N181 | N180 | N187 | Metal binding (side chain) | 42 |
M183 | M182 | I189 | Metal binding (main-chain oxygen) | 42 |
D429 | D428 | D477 | Binds C-2 hydroxyl of acceptor substrate; enantioselectivity of enzyme | 30, 42 |
H433 | H432 | H481 | Transition-state stabilization | 53 |
E372 | E372 | E418 | Binds N-1′ nitrogen of TPP cofactor (essential for catalytic activity) | 42, 52 |
R480 | R479 | R528 | Phosphate binding of substrate | 31, 42 |
Y394 | Y393 | F442 | Interaction with pyrimidine ring of TPP | 42 |
F397 | F396 | F445 | Interaction with pyrimidine ring of TPP | 42 |
Y402 | Y401 | Y448 | Interaction with pyrimidine ring of TPP | 42 |
Important conserved residues from S. cerevisiae transketolase and the similarly conserved residues in R. capsulatus DXPase-A and DXPase-B are compared. The proposed function of these residues is based on numerous studies of transketolases reported in the literature.