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. 2022 Sep 19;13:5485. doi: 10.1038/s41467-022-32993-8

Fig. 3. Domain-1 structure and the DPBB motif.

Fig. 3

a Domain-1 of the apo1 structure oriented to look down the double-psi β-barrel (DPBB) structural motif. The strands making up the DPBB are highlighted in bright green. b Topology diagram of Domain-1 highlighting the fold of the DPBB motif (bright green). c The two psi motifs (green and cyan) from the V-Csn apo1 structure, shown in approximately the same orientation so that their structural similarity is evident. d The two psi motifs in the context of the V-Csn apo1 structure. The green psi motif is in approximately the same orientation as in c and the cyan psi motif is rotated about 180° about an axis into the page. Together they make up the double-psi β-barrel (DPBB) structural motif. e Superposition of V-Csn Domain-1 (light green) and kiwellin from Actinidia chinensis (PDB code 4PMK; orange ribbon). Loop1 and Loop2 in kiwellin coincide approximately with parts of Domain-2 (pink ribbon) of V-Csn. f Superposition of V-Csn Domain-1 (light green) and endoglucanase V from Humicola insolens (PDB code 4ENG; yellow ribbon). Loops 1 and 2 in endoglucanase V correspond approximately with Domain-2 (pink ribbon) of V-Csn. g Superposition of V-Csn Domain-1 (light green) and expansin from Clavibacter michiganensis (PDB code 4JCW; light purple ribbon). Loop1 of the expansin corresponds to part of V-Csn Domain-2 (pink ribbon), however, the C-terminal domain of the expansin (C-domain) bears no structural similarity to V-Csn.