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. 2022 Sep 6;9:954638. doi: 10.3389/fmolb.2022.954638

TABLE 4.

ΔΔGL1L2bind in kcal/mol for the alchemical transformations of l51a into the two tautomeric forms of ligand l51b/l51bt of the FXa dataset. TF denotes results obtained with transformato. Values for ΔΔGL1L2AMBER and ΔΔGL1L2exp were taken from Hu et al. (2016).

Mutation ΔΔGL1L2TF ΔΔGL1L2AMBER ΔΔGL1L2exp
l51a → l51b (CGenFF charges) −1.23 ± 0.3 1.44 ± 0.2 −1.45
l51a → l51b (AMBER charges) 0.76 ± 0.3
l51a → l51bt (CGenFF charges) −1.07 ± 0.3 −1.19 ± 0.1
l51a → l51bt (AMBER charges) −0.56 ± 0.1