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. 2022 Sep 6;13:992328. doi: 10.3389/fgene.2022.992328

TABLE 4.

Pathway crosstalk information.

Pathway A Pathway B Score
Cells and Molecules involved in local acute inflammatory response Adhesion and Diapedesis of Granulocytes Focal adhesion 0.87500
lntegrins in angiogenesis Focal adhesion 0.81250
Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors 0.80556
IL23-mediated signaling events IL27-mediated signaling events 0.80000
PI3K-Akt signaling pathway Focal adhesion 0.78571
IL-17 signaling pathway IL27-mediated signaling events 0.71429
PI3K-Akt signaling pathway lntegrins in angiogenesis 0.67857
VEGF Hypoxia and Angiogenesis HIF-Fluid shear stress and atherosclerosis-alpha transcription factor network 0.67500
Ensemble of genes encoding core extracellular matrix including ECM glycoproteins collagens and proteoglycans Genes encoding collagen proteins 0.66667
IL23-mediated signaling events
PI3K-Akt signaling pathway IL-17 signaling pathway 0.65000
Genes encoding collagen proteins VEGF Hypoxia and Angiogenesis 0.64286
Cytokine-cytokine receptor interaction Protein digestion and absorption 0.62500
Cytokine-cytokine receptor interaction IL-17 signaling pathway 0.61607
Cytokine-cytokine receptor interaction IL27-mediated signaling events 0.60000
Free Radical Induced Apoptosis Glypican 1 network 0.60000
Cytokines can induce activation of matrix metalloproteinases which degrade extracellular matrix Adhesion and Diapedesis of Granulocytes 0.58333
Cytokines can induce activation of matrix metalloproteinases which degrade extracellular matrix IL27-mediated signaling events 0.58333
IL27-mediated signaling events Antifolate resistance 0.58333
Cytokine-cytokine receptor interaction
Ensemble of genes encoding core extracellular matrix including ECM glycoproteins collagens and proteoglycans Antifolate resistance 0.58333
VEGF Hypoxia and Angiogenesis IL 5 Signaling Pathway 0.56667
HIF-Fluid shear stress and atherosclerosis alpha transcription factor network Protein digestion and absorption 0.55385
Cells and Molecules involved in local acute inflammatory response Focal adhesion 0.54167
VEGF Hypoxia and Angiogenesis Focal adhesion 0.54167
HIF-Fluid shear stress and atherosclerosis alpha transcription factor network Free Radical Induced Apoptosis 0.53333
ATF-Fluid shear stress and atherosclerosis transcription factor network Glypican 1 network 0.53333
Cytokine-cytokine receptor interaction Glypican 1 network 0.53333
HIF-1 signaling pathway Signaling mediated by p38-alpha and p38-beta 0.53333
IL23-mediated signaling events IL23-mediated signaling events 0.52500
IL23-mediated signaling events VEGF Hypoxia and Angiogenesis 0.51136
amb2 Integrin signaling Cytokines can induce activation of matrix metalloproteinases which degrade extracellular matrix 0.50000
Mechanism of Gene Regulation by Peroxisome Proliferators via PPARa(alpha)
The IGF-1 Receptor and Longevity Antifolate resistance 0.50000
Adhesion and Diapedesis of Granulocytes 0.50000
Cytokines can induce activation of matrix metalloproteinases which degrade extracellular matrix Signaling mediated by p38-alpha and p38-beta 0.50000
IL27-mediated signaling events Longevity regulating pathway 0.50000
Antifolate resistance Hematopoietic cell lineage 0.50000
Fluid shear stress and atherosclerosis
Fluid shear stress and atherosclerosis Hematopoietic cell lineage 0.50000
IL-17 signaling pathway Hematopoietic cell lineage 0.50000
VEGF Hypoxia and Angiogenesis 0.48214
Free Radical Induced Apoptosis Angiopoietin receptor Tie2-mediated signaling 0.48214
Adhesion and Diapedesis of Granulocytes Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors 0.48214
Cytokines can induce activation of matrix metalloproteinases which degrade extracellular matrix Toll-like receptor signaling pathway 0.47619
Toll-like receptor signaling pathway Toll-like receptor signaling pathway 0.47619
Toll-like receptor signaling pathway Toll-like receptor signaling pathway
Th17 cell differentiation 0.47619
PI3K-Akt signaling pathway IL27-mediated signaling events 0.47619
Cytokine-cytokine receptor interaction Antifolate resistance 0.47619
Cytokine-cytokine receptor interaction IL27-mediated signaling events 0.47619
HIF-1 signaling pathway HIF-Fluid shear stress and atherosclerosis-alpha transcription factor network 0.47500
IL-17 signaling pathway VEGF Hypoxia and Angiogenesis 0.46875
IL-17 signaling pathway HIF-Fluid shear stress and atherosclerosis-alpha transcription factor network 0.46875
IL-17 signaling pathway PI3K-Akt signaling pathway 0.46667
IL-17 signaling pathway Free Radical Induced Apoptosis 0.45833
Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors Adhesion and Diapedesis of Granulocytes 0.45833
Focal adhesion Cytokines can induce activation of matrix metalloproteinases which degrade extracellular matrix 0.45833
HIF-1 signaling pathway Antifolate resistance 0.45833
Angiopoietin receptor Tie2-mediated signaling 0.45395
Fluid shear stress and atherosclerosis
Fluid shear stress and atherosclerosis Glypican 1 network 0.44444
Fluid shear stress and atherosclerosis Glypican 1 network 0.42424
Fluid shear stress and atherosclerosis IL-17 signaling pathway 0.41071
Fluid shear stress and atherosclerosis Cytokines can induce activation of matrix metalloproteinases which degrade extracellular matrix 0.40476
Fluid shear stress and atherosclerosis IL27-mediated signaling events 0.40476
Fluid shear stress and atherosclerosis Antifolate resistance 0.40476
PI3K-Akt signaling pathway Plasma membrane estrogen receptor signaling 0.40000
IL23-mediated signaling events 0.40000
IL-17 signaling pathway amb2 Integrin signaling 0.40000
Cytokine-cytokine receptor interaction Glypican 1 network 0.40000
Cytokine-cytokine receptor interaction Toll-like receptor signaling pathway 0.40000
Cytokine-cytokine receptor interaction Free Radical Induced Apoptosis 0.39583
Plasma membrane estrogen receptor signaling Adhesion and Diapedesis of Granulocytes 0.39583
Cells and Molecules involved in local acute inflammatory response Cytokines can induce activation of matrix metalloproteinases which degrade extracellular matrix 0.39583
Fat digestion and absorption Antifolate resistance 0.39583
lntegrins in angiogenesis Angiopoietin receptor Tie2-mediated signaling 0.38596
lntegrins in angiogenesis amb2 Integrin signaling 0.38596
amb2 Integrin signaling ABC transporters 0.38596
Mechanism of Gene Regulation by Peroxisome Proliferators via PPARa (alpha) VEGF Hypoxia and Angiogenesis 0.38596
Free Radical Induced Apoptosis HIF-Fluid shear stress and atherosclerosis-alpha transcription factor network 0.38596
Angiopoietin receptor Tie2-mediated signaling 0.38596
Adhesion and Diapedesis of Granulocytes ATF-Fluid shear stress and atherosclerosis transcription factor network 0.38596
Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors 0.38596
Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors 0.38596
0.38596
Cells and Molecules involved in local acute inflammatory response IL27-mediated signaling events
IL23-mediated signaling events 0.38596
amb2 Integrin signaling Toll-like receptor signaling pathway
Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors 0.32500
Cells and Molecules involved in local acute inflammatory response Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors 0.37500
0.31111
HIF-1 signaling pathway IL-17 signaling pathway 0.37500
HIF-1 signaling pathway HIF-Fluid shear stress and atherosclerosis-alpha transcription factor network
Cytokine-cytokine receptor interaction Angiopoietin receptor Tie2-mediated signaling 0.36111
Cytokine-cytokine receptor interaction Toll-like receptor signaling pathway 0.33333
Plasma membrane estrogen receptor signaling
IL23-mediated signaling events Th17 cell differentiation 0.33333
IL23-mediated signaling events amb2 Integrin signaling 0.33333
Mechanism of Gene Regulation by Peroxisome Proliferators via PPARa(alpha) Mechanism of Gene Regulation by Peroxisome Proliferators via PPARa(alpha) 0.33333
Hematopoietic cell lineage 0.32500
Fluid shear stress and atherosclerosis Hematopoietic cell lineage 0.32500
PI3K-Akt signaling pathway HIF-Fluid shear stress and atherosclerosis-alpha transcription factor network 0.32500
IL23-mediated signaling events Angiopoietin receptor Tie2-mediated signaling 0.32500
IL23-mediated signaling events Toll-like receptor signaling pathway 0.31667
Toll-like receptor signaling pathway Th17 cell differentiation 0.31250
Cytokine-cytokine receptor interaction Hematopoietic cell lineage 0.31111
Fluid shear stress and atherosclerosis Cells and Molecules involved in local acute inflammatory response 0.31111
Cells and Molecules involved in local acute inflammatory response Cytokine-cytokine receptor interaction 0.31111
Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors 0.30882
0.27143
IL-17 signaling pathway amb2 Integrin signaling 0.30000
IL-17 signaling pathway Hematopoietic cell lineage
Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors ATF-Fluid shear stress and atherosclerosis transcription factor network 0.30000
Fluid shear stress and atherosclerosis 0.30000
Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors 0.30000
Fluid shear stress and atherosclerosis
Phagosome Focal adhesion 0.25758
Fat digestion and absorption 0.28846
Phagosome Hematopoietic cell lineage
HIF-1 signaling pathway Plasma membrane estrogen receptor signaling 0.28750
HIF-1 signaling pathway lntegrins in angiogenesis 0.28333
HIF-1 signaling pathway
Ensemble of genes encoding core extracellular matrix including ECM glycoproteins collagens and proteoglycans Mineral absorption 0.28333
Focal adhesion 0.27692
Plasma membrane estrogen receptor signaling
0.27692
Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix 0.27692
amb2 Integrin signaling 0.27574
Ensemble of genes encoding core extracellular matrix including ECM glycoproteins collagens and proteoglycans
Fluid shear stress and atherosclerosis lntegrins in angiogenesis 0.27143
0.27143
Fluid shear stress and atherosclerosis lntegrins in angiogenesis
Cytokine-cytokine receptor interaction Mineral absorption 0.26667
Plasma membrane estrogen receptor signaling Hematopoietic cell lineage
IL-17 signaling pathway Focal adhesion 0.26250
Cytokine-cytokine receptor interaction PI3K-Akt signaling pathway 0.26250
Th17 cell differentiation 0.26250
Cytokine-cytokine receptor interaction Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors 0.26250
Cytokine-cytokine receptor interaction 0.25882
lntegrins in angiogenesis 0.12795
0.25758
Plasma membrane estrogen receptor signaling Hematopoietic cell lineage .25595
Phagosome Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors
Fluid shear stress and atherosclerosis Toll-like receptor signaling pathway 0.25556
Fluid shear stress and atherosclerosis Toll-like receptor signaling pathway 0.25556
Cytokine-cytokine receptor interaction HIF-1 signaling pathway 0.24762
PI3K-Akt signaling pathway PI3K-Akt signaling pathway
Toll-like receptor signaling pathway Toll-like receptor signaling pathway 0.24359
Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors 0.22549
PI3K-Akt signaling pathway 0.22500
Fluid shear stress and atherosclerosis Ensemble of genes encoding core extracellular matrix including ECM glycoproteins collagens and proteoglycans 0.22286
Fluid shear stress and atherosclerosis PI3K-Akt signaling pathway 0.22222
HIF-1 signaling pathway Focal adhesion 0.21212
Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors Phagosome 0.58333
PI3K-Akt signaling pathway Focal adhesion 0.19022
0.17788
PI3K-Akt signaling pathway Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors 0.17763
0.16993
HIF-1 signaling pathway Phagosome 0.16667
Complement and coagulation cascades Cytokine-cytokine receptor interaction
HIF-1 signaling pathway Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix 0.15887
HIF-1 signaling pathway Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors 0.15873
Fluid shear stress and atherosclerosis Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix
Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins ECM regulators and secreted factors 0.14348
Complement and coagulation cascades 0.51136
0.14091
0.13846
0.13636
0.12795