TABLE 2.
Conservation (E values) of the spoIIIA products and their SpoIIQ/GerM partners in various spore formers compared to B. subtilis
| Species | A | B | C | D | E | F | G | H | Q | M |
|---|---|---|---|---|---|---|---|---|---|---|
| Geobacillus kaustophilus | 1e−119a | 3e−55 | 1e−35 | 4e−58 | 1e−128 | 2e−44 | 1e−53 | 2e−42 | 4e−83 | 1e−146 |
| Brevibacillus brevis | 1e−111 | 3e−35 | 1e−18 | 2e−58 | 1e−112 | 3e−14 | 2e−41 | 1e−21 | 3e−51 | 3e−62 |
| Clostridium acetobutylicum | 3e−79 | 6e−19 | 1e−09 | 1e−29 | 2e−49 | 9e−12 | 5e−21 | 9e−09 | 5e−04 | ■ |
| Clostridioides difficile | 2e−74 | 1e−05 | 5e−11 | 2e−29 | 4e−28 | 5e−07 | 5e−14 | 2e−10 | 3e−05 | ■ |
| Bhargavaea lindanitolerans | ■ | ■ | 2e−07 | 2e−01 | 3e−04 | ■ | 4e−03 | 2e−23 | 6e−37 | ■ |
| Bhargavaea ginsengi | ■ | ■ | 1e−09 | ND | 3e−05 | ■ | 3e−04 | 4e−21 | 2e−42 | ■ |
| Sporosarcina ureae | ■ | ■ | 1e−07 | 2e−05 | 3e−09 | ■ | 7e−04 | 3e−19 | 4e−35 | ■ |
| Sporosarcina psychrophila | ■ | ■ | 7e−08 | 2e−01 | 3e−08 | ■ | 2e−05 | 5e−17 | 7e−34 | ■ |
| Sporosarcina ureilytica | ■ | ■ | 6e−07 | ND | 1e−11 | ■ | 1e−02 | 4e−17 | 1e−30 | ■ |
| Bacillus sp. OxB-1 | ■ | ■ | 7e−08 | 7e−00 | 4e−08 | ■ | 1e−04 | 2e−22 | 8e−28 | ■ |
| Psychrobacillus glaciei | ■ | ■ | 5e−07 | ND | 9e−11 | ■ | 4e−04 | 2e−20 | 2e−26 | ■ |
| Psychrobacillus sp. AK1817 | ■ | ■ | 4e−07 | ND | 8e−12 | ■ | 3e−04 | 9e−21 | 5e−27 | ■ |
| Viridibacillus arvi | ■ | ■ | 2e−07 | ND | 5e−03 | ■ | 7e−08 | 3e−28 | 3e−37 | ■ |
| Viridibacillus sp. JNUCC-6 | ■ | ■ | 2e−07 | ND | 8e−04 | ■ | 7e−08 | 2e−27 | 7e−37 | ■ |
| Rummeliibacillus stabekisii | ■ | ■ | 3e−06 | ND | 1e−07 | ■ | 2e−07 | 2e−24 | 4e−41 | ■ |
| Rummeliibacillus pycnus | ■ | ■ | 1e−06 | ND | 5e−07 | ■ | 5e−10 | 5e−27 | 8e−39 | ■ |
| Ureibacillus thermosphaericus | ■ | ■ | 4e−07 | ND | 5e−03 | ■ | 1e−05 | 3e−27 | 4e−30 | ■ |
| Metasolibacillus fluoroglycofenilyticus | ■ | ■ | 1e−06 | ND | ND | ■ | 7e−06 | 4e−23 | 1e−31 | ■ |
| Solibacillus silvestris | ■ | ■ | 6e−06 | ND | ND | ■ | 5e−09 | 5e−29 | 5e−26 | ■ |
| Lysinibacillus fusiformis | ■ | ■ | 2e−07 | ND | 4e−06 | ■ | 4e−05 | 6e−30 | 1e−32 | ■ |
| Lysinibacillus sphaericus | ■ | ■ | 2e−07 | ND | 4e−06 | ■ | 1e−05 | 9e−28 | 6e−34 | ■ |
| Paenisporosarcina antarctica | ■ | ■ | 6e−07 | ND | 2e−09 | ■ | 3e−04 | 1e−25 | 6e−33 | ■ |
| Beduini massiliensis | ■ | ■ | ■ | ■ | ■ | ■ | ■ | 7e−08 | 7e−31 | 2e−19 |
| Coprobacillus cateniformis | ■ | ■ | ■ | ■ | ■ | ■ | ■ | 5e−06 | 5e−33 | 2e−13 |
| Faecalibacillus intestinalis | ■ | ■ | ■ | ■ | ■ | ■ | ■ | 1e−03 | 2e−31 | 1e−08 |
| Erysipelatoclostridium spiroforme | ■ | ■ | ■ | ■ | ■ | ■ | ■ | 2e−05 | 1e−35 | 4e−11 |
| Erysipelatoclostridium ramosum | ■ | ■ | ■ | ■ | ■ | ■ | ■ | 5e−05 | 1e−34 | 2e−13 |
| Amedibacillus dolichus | ■ | ■ | ■ | ■ | ■ | ■ | ■ | 4e−04 | 4e−17 | 8e−31 |
| Clostridium innocuum | ■ | ■ | ■ | ■ | ■ | ■ | ■ | 2e−08 | 3e−18 | 6e−32 |
| Longicatena caecimuris | ■ | ■ | ■ | ■ | ■ | ■ | ■ | 6e−05 | 5e−20 | 2e−28 |
| Holdemania filiformis | ■ | ■ | ■ | ■ | ■ | ■ | ■ | 4e−03 | 9e−21 | 2e−23 |
a
E values were obtained by running a BLASTP search against the SubtiList database (http://genolist.pasteur.fr/SubtiList/). Two species of Bacilli belonging to other families than B. subtilis and two species of Clostridia from different orders were used as internal references. ■, gene absent; ND, gene present but has product with no detectable similarity in the B. subtilis proteome.