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. 2022 Aug 5;11:e74810. doi: 10.7554/eLife.74810

Table 3. Overview of possible reactions and their rates in the model.

Reaction Condition Triplet notation Reaction rate
Binding of PI(4,5)P2 to unbound syt n+m+k<nsyts and n+k < Mslots (n,m,k)->(n,m,k+1) (nsyts-n-m-k)(Mslots-n-k) [PI(4,5)P2
Unbinding of PI(4,5)P2 k>0 (n,m,k)->(n,m,k-1)
Binding of Ca2+2 to unbound syt n+m+k<nsyts (n,m,k)->(n,m+1,k) (nsyts-n-m-k)[Ca2+]2α
Unbinding of Ca2+2 m>0 (n,m,k)->(n,m-1,k)
Binding of PI(4,5)P2 to form dual binding n+k<Mslots and m>0 (n,m,k)->(n+1,m-1,k) m(Mslots-n-k)[PI(4,5)P2] γ
Unbinding of PI(4,5)P2 from a dual binding n>0 (n,m,k)->(n-1, m+1,k) Anδ
Binding of Ca2+2 to form a dual binding k>0 (n,m,k)->(n+1,m,k-1) k[Ca2+]2α
Unbinding of Ca2+2 from a dual binding n>0 (n,m,k)->(n-1,m,k+1) Anβ
Fusion (n,m,k)->(F) L+⋅fn