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. 2001 Jan;183(2):500–511. doi: 10.1128/JB.183.2.500-511.2001

TABLE 3.

Predicted gene products and the homology exhibited by their potential protein products to amino acid sequences in the databasea

Predicted gene Coding position
Product size
Predicted pI Homology
Description and function of closest relativeb
Start Stop aac kDa BLAST score aa identityd
purF <1 940 >312 >34.6 4.67 e-124 73/300 Phosphoribosylpyrophosphate amidotransferase precursor of L. lactis (EC 2.4.2.14) [U64311]
purM 995 2017 340 36.4 4.54 e-128 69/339 Phosphoribosylformylglycineamide cycloligase of L. lactis subsp. cremoris (EC 6.3.3.1) [AF016634]
purN 2014 2565 183 20.5 4.88 8e-58 71/150 Phosphoribosylglycineamide formyltransferase homolog of S. pyogenes (EC 22.1.2.2) [U70775]
purH 2575 4122 515 56.6 4.83 e-169 58/513 Phosphoribosylamidoimidazole carboxyamide formyltransferase of B. subtilis (EC 6.3.2.6) [J02732]
ssuMA 4187 5017 276 31.8 4.93 e-114 71/275 M.LlaDCHI A of L. lactis [U16027]
e-110 70/274 M.DpnII 1 of S. pneumoniae [M14339]
ssuMB 5007 5822 271 31.2 9.50 e-145 90/266 M.DpnA of S. pneumoniae [M14339]
e-139 86/263 M.LlaDCHI B of L. lactis [U16027]
ssuRA 5800 6726 308 36.0 5.20 3e-78 49/299 R.DpnII of S. pneumoniae [M14339]
ssuRB 6726 7631 301 34.4 5.17 e-126 72/300 R.LlaDCHI of L. lactis [U16027]
purD 7752 9014 420 45.3 4.48 e-125 54/419 Phosphoribosylamineglycine ligase of L. lactis (EC 6.3.4.13) [AJ000883]
purE 9040 9528 162 16.8 6.36 4e-41 61/139 Phosphoribosylamidoimidazole carboxylase catalytic subunit of B. subtilis (EC 4.1.1.21) [J02732]
a

Proteins relating to purine biosynthesis have been named according to their closest relative, probable function, and E. coli gene designations (60). Coding region positions are numbered with respect to the entire 9,618-bp sequence determined (AB045609) and from the first base of the start codon to the last base of the stop codon. The Genetyx-Mac program (Software Developing Company) was used to make predictions of coding regions, molecular masses, and isoelectric points. 

b

Numbers in blackets are accession numbers in the DDBJ/EMBL/GenBank database. 

c

aa, amino acids. 

d

Percent identity/number of amino acids evaluated.