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. 2022 Sep 20;17(1):1495–1506. doi: 10.1515/med-2022-0551

Table 3.

Functional annotation analysis of first 100 differentially expressed genes

Annotation cluster 1 Pathways enrichment score: 2.05 p-Value Benjamini
INTERPRO Neurotransmitter-gated ion-channel. conserved site 8.80 × 10−4 6.00 × 10−2
INTERPRO Neurotransmitter-gated ion-channel transmembrane domain 1.00 × 10−3 6.00 × 10−2
INTERPRO Neurotransmitter-gated ion-channel 1.00 × 10−3 6.00 × 10−2
INTERPRO Neurotransmitter-gated ion-channel ligand binding 1.00 × 10−3 6.00 × 10−2
INTERPRO Nicotinic acetylcholine receptor 2.40 × 10−3 1.20 × 10−1
UP_KEYWORDS Synapse 2.80 × 10−3 2.20 × 10−1
UP_KEYWORDS Ion channel 2.90 × 10−3 2.20 × 10−1
UP_KEYWORDS Ligand-gated ion channel 3.90 × 10−3 2.20 × 10−1
GOTERM_MF_DIRECT Acetylcholine receptor activity 4.20 × 10−3 3.50 × 10−1
GOTERM_MF_DIRECT Acetylcholine-activated cation-selective channel activity 4.20 × 10−3 3.50 × 10−1
INTERPRO Nicotinic acetylcholine-gated receptor, transmembrane domain 4.30 × 10−3 1.70 × 10−1
GOTERM_CC_DIRECT Acetylcholine-gated channel complex 4.30 × 10−3 6.10 × 10−10
GOTERM_MF_DIRECT Acetylcholine binding 5.30 × 10−3 3.50 × 10−1
UP KEYWORDS Postsynaptic cell membrane 5.50 × 10−3 2.30 × 10−1
GOTERM_BP_DIRECT Neuromuscular synaptic transmission 5.50 × 10−3 1.00 × 1000
GOTERM MF_DIRECT Ligand-gated ion channel activity 1.00 × 10−2 4.90 × 10−1
GOTERM_BP_DIRECT Synaptic transmission, cholinergic 1.10 × 10−2 1.00 × 1000
Annotation cluster 2 Pathways enrichment score: 1.93 p-value Benjamini
KEGG_PATHWAY RAS 4.60 × 10−6 3.60 × 10−4
GOTERM_BP_DIRECT Proteolysis 2.00 × 10−2 1.00 × 1000
GOTERM_MF_DIRECT RT Metallopeptidase activity 4.60 × 10−2 1.00 × 1000
UP_KEYWORDS Protease 6.30 × 10−2 8.00 × 10−1
Annotation cluster 3 Pathways enrichment score: 0.83 p-value Benjamini
UP_KEYWORDS Zinc 4.50 × 10−1 1.00 × 1000
GOTERM_MF DIRECT Zinc ion binding 2.20 × 10−1 1.00 × 1000
UP_KEYWORDS Metal binding 3.60 × 10−1 1.00 × 1000
INTERPRO Zinc finger C2H2-type/integrase DNA binding domain 7.90 × 10−1 1.00 × 1000
SMART ZnF C2H2 7.90 × 10−1 1.00 × 1000
INTERPRO Zinc finger, C2H2-like 8.20 × 10−1 1.00 × 1000
UP_KEYWORDS Zinc finger 8.40 × 10−1 1.00 × 1000
UP_SEQ_FEATURE Metal ion-binding site: zinc; catalytic 0.092 1
INTERPRO Zinc finger, C2H2 8.40 × 10−1 1.00 × 1000