TABLE 3.
Primers used in this study
| Primer | Sequence (5′ → 3′) |
|---|---|
| G251E-5′ | GTTAAAGCGGAAGTGTATGAGCGTCCGAAACACATCa |
| G251E-3′ | GATGTGTTTCGGACGCTCATACACTTCCGCTTTAAC |
| EspI-5′ | GAGTGCTTAGCCGAAACCTGGb |
| NsiI-3′ | TTCATGCATCTGTTTGGTGCG |
| H354Y-5′ | GTTGGGTGTTGCTGCGTACTGGAAATATAAAG |
| H354Y-3′ | CTTTATATTTCCAGTACGCAGCAACACCCAAC |
| BamHI-3′ | CTCTAGAGGATCCCCTATGTAG |
| Yg4 (PstI) | TGCACTGCAGTTAATAAGCCGAGTGCCG |
| B3(HindIII) | GCGACGAAGCTTCTAACTCCCGTGCAACCG ACGCGC |
| C612G-5′ | GCACCACATCGCGCGCGGCTGCCAGCCGATTC |
| C612G-3′ | GAATCGGCTGGCAGCCGCGCGCGATGTGGTGC |
| D637R-5′ | GTATTTCAGTACACCGCGCCCGTTGCGAACAACTGGCGG |
| D637R-3′ | CCGCCAGTTGTTCGCAACGGGCGCGGTGTACTGAAATAC |
| C638F-5′ | CAGTACACCGCGCCGATTTCGAACAACTGGCGGAAC |
| C638F-3′ | CAGTTCCGCCAGTTGTTCGAAATCGGCGCGGTGTAC |
| NsiI-5′ | CAAATCCGCACCAAACAGATGCATGAAG |
| N-up | CTGCAGGTACCTATGGTTGCGGTAAGAAGT |
| N-down | TGAGGGTACCTGCAGCTGGTAGGTGAACGG |
| C-up | CTGCAGGTACCTTTTAATAAGCCGAGTGCCG |
| C-down | TGACGGTACCCGACTCCCGTGCAACCGACGC |
| C-long-up | CTGCAGGTACCTTACCAGCTGCAGATGGGCG |
| N-long-down | TGAGGGTACCTGATTAAATTGCGATTGCAGG |
Mutated bases are indicated in bold type.
Restriction sites are underlined.