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. 2022 Sep 21;15:19. doi: 10.1186/s13040-022-00305-x

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© The Author(s) 2022

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 8 — The model consistency check for 500 KB resolution structures generated by ParticleChromo3D using different evaluation metrics. A The average DSCC Between 30 Structures per chromosome at 500 KB Resolution for the GM12878 datasets. B The average DPCC Between 30 Structures per chromosome at 500 KB Resolution for the GM12878 datasets. C The average TM-Score Between 30 Structure per chromosome at 500 KB Resolution for the GM12878 datasets. D The boxplot shows the distribution of the 30 structure's TM-score by chromosome for the GM12878 datasets. The Y-axis denotes the DSCC and DPCC metric score in the range [-1,1], and TM-Score in the range [-0,1]. The X-axis denotes the chromosome. A higher DSCC, DPCC, and TM-Score value is better