| ATAC-seq | Assay of Transposase Accessible Chromatin sequencing |
| BP | biological process |
| BT | butyrate |
| CC | cellular component |
| ChIP-seq | Chromatin immunoprecipitation followed by sequencing |
| CT | control |
| DCBS | CTCF-binding sites |
| ECM | extracellular matrix |
| EMT | epithelial–mesenchymal transition |
| ENCODE | The Encyclopedia of DNA Elements |
| FC | fold change |
| FDR | false discovery rate |
| FRiP | fraction of reads in peaks |
| GEO | Gene Expression Omnibus |
| GO | Gene Ontology |
| IPA | ingenuity pathway analysis |
| MAPQ | mapping quality |
| MDBK | Madin–Darby bovine kidney |
| MF | molecular function |
| MT | mitochondrial |
| SCFAs | short-chain fatty acids |
| TSS | transcription starting site |