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. 2022 Aug 25;12(9):1177. doi: 10.3390/biom12091177
ATAC-seq Assay of Transposase Accessible Chromatin sequencing
BP biological process
BT butyrate
CC cellular component
ChIP-seq Chromatin immunoprecipitation followed by sequencing
CT control
DCBS CTCF-binding sites
ECM extracellular matrix
EMT epithelial–mesenchymal transition
ENCODE The Encyclopedia of DNA Elements
FC fold change
FDR false discovery rate
FRiP fraction of reads in peaks
GEO Gene Expression Omnibus
GO Gene Ontology
IPA ingenuity pathway analysis
MAPQ mapping quality
MDBK Madin–Darby bovine kidney
MF molecular function
MT mitochondrial
SCFAs short-chain fatty acids
TSS transcription starting site