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. 2022 Sep 18;10(9):2318. doi: 10.3390/biomedicines10092318
ANTE Atlas of Normal Tissue Expression
ComBat COMpensation of BATch effects
CS Column Sample
CuBlock Cubic Blocks
DBNorm Distribution-Based Normalization
DisTran Distribution Transformation
DESeq(2) Differential Gene Expression in Sequencing (2)
DWD Distance-Weighted Distribution
EB Empirical Bayes
ESLR Elastic Shared LASSO Regularization
FCQN Feature-Specific QN
fRMA Frozen Robust Microarray Analysis
gcRMA GeneChip Robust Microarray Analysis
GEO Gene Expression Omnibus
GQ Gene Quantiles
GTEx Genotype Tissue Expression
IBN Integrative Bayesian Network
IG Information Gain
LASSO Least Absolute Shrinkage and Selection Operator
MAQC Microarray Quality Control
MBEI Model-Based Expression Indices
MC Median Center
MH Microarray Hybridization
ML Machine Learning
MM MatchMixeR
MRS Median Rank Score
NGS Next-Generation Sequencing
NorDi Normalized Discretization
PAM Prediction Analysis for Microarrays
PCA Principal Component Analysis
PILER Probe Logarithmic Intensity ERror
PLIDA PLatform-Independent Latent Dirichlet Allocation
PRIDE PRoteomics Identification DatabasE
QD Quantile Discretization
QN Quantile Normalization
QNR Qunatile Normalization (Robust)
RMA Robust Microarray Analysis
SEQC Sequencing Quality Control
SVM support vector machine
TCGA The Cancer Genome Atlas
TDM Training Distribution Machine
UPC Universal exPression Code
WM Watermelon Multisection
XPC Cross-Platform Comparison
XPN Cross-Platform Normalization